DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment scrt and CG1529

DIOPT Version :9

Sequence 1:	NP_001261390.1	Gene:	scrt / 38469	FlyBaseID:	FBgn0004880	Length:	653	Species:	Drosophila melanogaster
Sequence 2:	NP_001138223.2	Gene:	CG1529 / 33077	FlyBaseID:	FBgn0031144	Length:	512	Species:	Drosophila melanogaster

Alignment Length:	153	Identity:	41/153 - (26%)
Similarity:	70/153 - (45%)	Gaps:	14/153 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly   459 TPDQQKTKYTCSECGKQYATSSNLSRH-KQTHRSLDSQSAKKCHTCGKAYVSMPALAMHL----- 517
            |..:::....|.:||||......|..| :..|:.......  |.:|.|::.....|..|:
  Fly   161 TGSKRRAGLACDQCGKQVYKLPYLEAHIRSVHQGYSKPFL--CRSCDKSFTRYEQLRSHMRNAHP 223

  Fly   518 ----LTHKLSH-SCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSVD 577
                |..:|.. .|.:|.:.:|....|..||:.|...|.:.|.|||.|...|:.|..|::||:..
  Fly   224 QLEQLQQELRDLICELCNRQYSTKNALGEHLKRHAQRKEHVCEHCGVAKVTRTELLTHLRTHNPT 288

  Fly   578 -KNFECKRCHKTFALKSYLNKHL 599
             :.|:|::|.:.|..||.:::|:
  Fly   289 WERFKCEQCPQLFRHKSAISRHV 311

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
scrt	NP_001261390.1	zf-C2H2	467..489	CDD:278523	7/22 (32%)
		C2H2 Zn finger	469..489	CDD:275370	7/20 (35%)
		C2H2 Zn finger	500..520	CDD:275368	6/28 (21%)
		COG5048	520..>617	CDD:227381	26/82 (32%)
		C2H2 Zn finger	526..546	CDD:275368	6/19 (32%)
		zf-H2C2_2	539..562	CDD:290200	10/22 (45%)
		C2H2 Zn finger	554..574	CDD:275368	8/19 (42%)
		zf-C2H2	554..574	CDD:278523	8/19 (42%)
		zf-H2C2_2	566..590	CDD:290200	7/24 (29%)
		C2H2 Zn finger	582..599	CDD:275368	5/16 (31%)
CG1529	NP_001138223.2	zf-AD	11..79	CDD:285071
		C2H2 Zn finger	171..192	CDD:275368	7/20 (35%)
		zf-C2H2_2	201..>257	CDD:289522	13/55 (24%)
		C2H2 Zn finger	201..222	CDD:275368	5/20 (25%)
		C2H2 Zn finger	237..257	CDD:275368	6/19 (32%)
		C2H2 Zn finger	265..285	CDD:275368	8/19 (42%)
		zf-C2H2_8	268..349	CDD:292531	15/44 (34%)
		C2H2 Zn finger	294..315	CDD:275368	6/18 (33%)
		C2H2 Zn finger	323..343	CDD:275368
		C2H2 Zn finger	360..380	CDD:275368
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45457077
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930