DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrt and zbtb16a

DIOPT Version :9

Sequence 1:NP_001261390.1 Gene:scrt / 38469 FlyBaseID:FBgn0004880 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_955929.1 Gene:zbtb16a / 323269 ZFINID:ZDB-GENE-030131-1989 Length:671 Species:Danio rerio


Alignment Length:492 Identity:118/492 - (23%)
Similarity:166/492 - (33%) Gaps:141/492 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 SGNGSGDQHLAAYQTPPSSTTSSPSCSPSGAGDRYSP--------LSSGQTSSERKCFSSTGATL 236
            ||..|..|...|.   |.....|||.|.|......||        :|.||:..:.......||  
Zfish   167 SGYVSAAQQALAL---PGMVDQSPSVSTSFGLSTMSPTKAAVDSLMSIGQSLLQSTMHPGVGA-- 226

  Fly   237 SLPPKKKDIYRPYSLDDKPAHGYRRRVPAEEDLHAAHAILDLSASTAFHPPTQPHQLQQQQQQQQ 301
                            ::|.||..                        ||.....:.:..|..:.
Zfish   227 ----------------EQPLHGNS------------------------HPMMGEIKTEMMQVDES 251

  Fly   302 QQHQHHHSQQQHLA--------PQQH-------------------HYLPLQQQQQQQAHHTHLPT 339
            .:|:...:.:...:        |.::                   ||:..:....|||..:.: .
Zfish   252 GEHESPKAMESIASSNGERSGEPDKNRDGPGTPTRSSVITSARELHYVRDEGLGDQQAEVSQM-G 315

  Fly   340 LEAHA-----HLRSTSSIAELAAAASVVNEQRPASNASSASSNHM-PSSPSSNSSSS------SS 392
            |||.|     ||.|...|     .::..||...:..||.|||.|| |:...|...|:      .|
Zfish   316 LEAMAGMTEKHLASLYGI-----PSNHKNEAMLSMPASMASSLHMSPALAMSMDFSAYGGLLPQS 375

  Fly   393 QVQNE-----NSNTTNTNPDG----DGC------LQDGE--------HSGASGASAKTVAYTYEA 434
            .:|.|     ........|||    :.|      |.|.|        |||......:.....:  
Zfish   376 FIQREFFSKLGELAAGIKPDGRSLNERCNVCGAELPDNEAIEQHRKLHSGMKTYGCELCGKRF-- 438

  Fly   435 FFVSDGRSKRKHVADPAAAASGVPTPDQQKTKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKK 499
               .|....|.|:...:|....:          .|.:||.|:.....|..|:|.|..  |..|..
Zfish   439 ---LDSLRLRMHLLSHSAGEKAI----------VCDQCGAQFQKEDALEAHRQIHTG--SDMAIF 488

  Fly   500 CHTCGKAYVSMPALAMHLLTHK--LSHSCGVCGKLFSRPWLLQGHLRSHT-GEKPYGCAHCGKAF 561
            |..|||.:.:..||..|:..|.  .|:.|..|.:.|.....|:.|||||| |:.|:.|..||..|
Zfish   489 CLLCGKRFQTQTALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTAGDHPFECEFCGSCF 553

  Fly   562 ADRSNLRAHMQTHSVDKNFECKRCHKTFALKSYLNKH 598
            .|.|.|:.|.:.|:.:|.:||..|.|.|:||..|..|
Zfish   554 RDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETH 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scrtNP_001261390.1 zf-C2H2 467..489 CDD:278523 7/21 (33%)
C2H2 Zn finger 469..489 CDD:275370 7/19 (37%)
C2H2 Zn finger 500..520 CDD:275368 7/19 (37%)
COG5048 520..>617 CDD:227381 33/82 (40%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 539..562 CDD:290200 12/23 (52%)
C2H2 Zn finger 554..574 CDD:275368 8/19 (42%)
zf-C2H2 554..574 CDD:278523 8/19 (42%)
zf-H2C2_2 566..590 CDD:290200 8/23 (35%)
C2H2 Zn finger 582..599 CDD:275368 8/17 (47%)
zbtb16aNP_955929.1 BTB 25..106 CDD:279045
BTB 35..>106 CDD:197585
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 130..167 118/492 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 248..289 2/40 (5%)
C2H2 Zn finger 403..423 CDD:275368 4/19 (21%)
C2H2 Zn finger 431..451 CDD:275368 3/24 (13%)
COG5048 <445..620 CDD:227381 53/158 (34%)
C2H2 Zn finger 460..480 CDD:275368 7/19 (37%)
C2H2 Zn finger 489..509 CDD:275368 7/19 (37%)
zf-C2H2 515..537 CDD:278523 7/21 (33%)
C2H2 Zn finger 517..537 CDD:275368 7/19 (37%)
C2H2 Zn finger 546..566 CDD:275368 8/19 (42%)
zf-H2C2_2 559..582 CDD:290200 8/22 (36%)
C2H2 Zn finger 574..594 CDD:275368 8/17 (47%)
zf-H2C2_2 587..608 CDD:290200 2/4 (50%)
C2H2 Zn finger 602..622 CDD:275368
C2H2 Zn finger 630..650 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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