DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrt and CG32772

DIOPT Version :10

Sequence 1:NP_523911.2 Gene:scrt / 38469 FlyBaseID:FBgn0004880 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_572196.3 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster


Alignment Length:361 Identity:94/361 - (26%)
Similarity:148/361 - (40%) Gaps:82/361 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 AAHAILDLSASTAFHPPTQPHQLQQQQQQQQQQHQHHHSQQQHLAPQQHHYLPLQQQQQQQAHHT 335
            |:.|....|:|||....:.. ..||||.|..||.||.:||||            ||||||....:
  Fly    58 ASAAAAATSSSTASSSDSDA-IAQQQQHQNPQQQQHQNSQQQ------------QQQQQQMQSSS 109

  Fly   336 HLPTLEAHAHLRSTSSIAELAAAASVVNEQRPASNASSASSNHMPSSPSSNSSSSSSQVQNENSN 400
            ....|::    :..|...:|     :.||:         .|..:.:...|..||..:.::|    
  Fly   110 SSENLQS----QDDSEDVDL-----IFNEE---------GSCPLCNKTFSRKSSLMTHIRN---- 152

  Fly   401 TTNTNPDGDGCLQDGEHSGASGASAKTV-AYTYEAFFVSDGRSKRKHVADPAAAASGVPTPDQQK 464
                            ||    |..|.| .|.::.|  :...:.|.|        ..:.|.|:  
  Fly   153 ----------------HS----AERKFVCTYCHKGF--TQAANLRNH--------ERIHTNDR-- 185

  Fly   465 TKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCH--TCGKAYVSMPALAMHLLTHK--LSHS 525
             .|.|.:|||.:...:||:.|::.|   ..:....|:  .||:::..:..|..|:.:|.  ..:.
  Fly   186 -PYQCVDCGKTFTQITNLNNHRRLH---TGERPFVCNEPECGRSFAQVTNLNNHMKSHHKVQQYC 246

  Fly   526 CGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHC-GKAFADRSNLRAHMQTHSVDKNFECKRCHKTF 589
            |.||.|.|::...|..||::|.|...|.|..| .|.|..:|.|..||:||.:...:||.:|.:.|
  Fly   247 CNVCNKKFTQVTSLNQHLQAHAGVTGYYCPRCPEKNFKLQSQLHTHMKTHGLAFPYECDKCDEKF 311

  Fly   590 ALKSYLNKHLESACLKDEEELMMSMSLSMHDSNSES 625
            ..:::|::|     ||..:|......:.....|.||
  Fly   312 LQQAHLDQH-----LKMHDEFKFKCDICPSSFNQES 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scrtNP_523911.2 zf-C2H2 467..489 CDD:395048 8/21 (38%)
C2H2 Zn finger 469..489 CDD:275370 7/19 (37%)
C2H2 Zn finger 500..520 CDD:275368 5/21 (24%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 539..562 CDD:463886 9/23 (39%)
C2H2 Zn finger 554..574 CDD:275368 8/20 (40%)
zf-C2H2 554..574 CDD:395048 8/20 (40%)
zf-H2C2_2 566..590 CDD:463886 8/23 (35%)
C2H2 Zn finger 582..599 CDD:275368 4/16 (25%)
CG32772NP_572196.3 C2H2 Zn finger 133..153 CDD:275368 4/39 (10%)
C2H2 Zn finger 161..181 CDD:275368 4/29 (14%)
zf-H2C2_2 173..198 CDD:463886 9/35 (26%)
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
C2H2 Zn finger 217..239 CDD:275368 5/21 (24%)
SUF4-like 222..>267 CDD:411020 13/44 (30%)
C2H2 Zn finger 222..240 CDD:411020 4/17 (24%)
C2H2 Zn finger 247..267 CDD:411020 8/19 (42%)
C2H2 Zn finger 247..267 CDD:275368 8/19 (42%)
C2H2 Zn finger 275..296 CDD:275368 8/20 (40%)
C2H2 Zn finger 304..324 CDD:275368 7/24 (29%)
C2H2 Zn finger 331..351 CDD:275368 3/12 (25%)
C2H2 Zn finger 359..380 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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