| Sequence 1: | NP_001261390.1 | Gene: | scrt / 38469 | FlyBaseID: | FBgn0004880 | Length: | 653 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001012053.2 | Gene: | Zkscan3 / 306977 | RGDID: | 1305753 | Length: | 553 | Species: | Rattus norvegicus |
| Alignment Length: | 371 | Identity: | 97/371 - (26%) |
|---|---|---|---|
| Similarity: | 142/371 - (38%) | Gaps: | 73/371 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 246 YRPYSLDDKPAHGYRRRVPAEED---LHAAHAILDLSASTAFHPPTQPHQLQQQQQQQQQQHQHH 307
Fly 308 HSQQQHLAPQQHHYLPLQQQQQQQAHHTHLPTLEAHAHLRSTSSIAELAAAASVVNEQRPA-SNA 371
Fly 372 SSASSNHMPSSPSSNSSSSSSQVQNENSNTTNTNPDGDGCLQDGEHSGASGASAKTVAYTYEAFF 436
Fly 437 VSDGRSKRKHVADPAAAASGVPTPDQQ------------KTKYTCSECGKQYATSSNLSRHKQTH 489
Fly 490 RSLDSQSAKKCHTCGKAYVSMPALAMHLLTH--KLSHSCGVCGKLFSRPWLLQGHLRSHTGEKPY 552
Fly 553 GCAHCGKAFADRSNLRAHMQTHSVDKNFECKRCHKTFALKSYLNKH 598 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| scrt | NP_001261390.1 | zf-C2H2 | 467..489 | CDD:278523 | 12/21 (57%) |
| C2H2 Zn finger | 469..489 | CDD:275370 | 12/19 (63%) | ||
| C2H2 Zn finger | 500..520 | CDD:275368 | 8/19 (42%) | ||
| COG5048 | 520..>617 | CDD:227381 | 33/81 (41%) | ||
| C2H2 Zn finger | 526..546 | CDD:275368 | 9/19 (47%) | ||
| zf-H2C2_2 | 539..562 | CDD:290200 | 14/22 (64%) | ||
| C2H2 Zn finger | 554..574 | CDD:275368 | 7/19 (37%) | ||
| zf-C2H2 | 554..574 | CDD:278523 | 7/19 (37%) | ||
| zf-H2C2_2 | 566..590 | CDD:290200 | 7/23 (30%) | ||
| C2H2 Zn finger | 582..599 | CDD:275368 | 7/17 (41%) | ||
| Zkscan3 | NP_001012053.2 | SCAN | 47..159 | CDD:128708 | 10/35 (29%) |
| KRAB_A-box | 213..271 | CDD:413388 | 10/57 (18%) | ||
| zf-C2H2 | 313..335 | CDD:395048 | 12/21 (57%) | ||
| C2H2 Zn finger | 315..335 | CDD:275368 | 12/19 (63%) | ||
| zf-H2C2_2 | 328..350 | CDD:404364 | 10/24 (42%) | ||
| zf-C2H2 | 341..363 | CDD:395048 | 8/21 (38%) | ||
| C2H2 Zn finger | 343..363 | CDD:275368 | 8/19 (42%) | ||
| COG5048 | <367..514 | CDD:227381 | 32/77 (42%) | ||
| C2H2 Zn finger | 371..391 | CDD:275368 | 9/19 (47%) | ||
| C2H2 Zn finger | 399..419 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 427..447 | CDD:275368 | 7/17 (41%) | ||
| C2H2 Zn finger | 481..501 | CDD:275368 | |||
| zf-C2H2 | 507..529 | CDD:395048 | |||
| C2H2 Zn finger | 509..529 | CDD:275368 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 111 | 1.000 | Inparanoid score | I4772 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.960 | |||||