DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment scrt and snai-1

DIOPT Version :9

Sequence 1:	NP_001261390.1	Gene:	scrt / 38469	FlyBaseID:	FBgn0004880	Length:	653	Species:	Drosophila melanogaster
Sequence 2:	NP_499902.2	Gene:	snai-1 / 186874	WormBaseID:	WBGene00019299	Length:	193	Species:	Caenorhabditis elegans

Alignment Length:	173	Identity:	77/173 - (44%)
Similarity:	97/173 - (56%)	Gaps:	14/173 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly   442 SKRKHVAD-----------PAAAASGVPTPDQQKTKYTCSECGKQYATSSNLSRHKQTHRSLDSQ 495
            :|||.:.:           |::::|..........|..|..|.|.|.|...|.||.|.|:  :.:
Worm     5 TKRKSIFETIEDLISPDPAPSSSSSSASCSSLDNQKLVCQFCKKTYLTYFGLRRHLQFHK--EGK 67

  Fly   496 SAKKCHTCGKAYVSMPALAMHLLTHKLSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKA 560
            ..:.|..|.|.|.|..||.|||.||.|...|..|||.|||||||:||||:||||||:||..||:.
Worm    68 LQQSCPHCKKVYRSPGALKMHLKTHSLPCVCNDCGKSFSRPWLLKGHLRTHTGEKPFGCEFCGRC 132

  Fly   561 FADRSNLRAHMQTHSVDKNFECKRCHKTFALKSYLNKHLESAC 603
            ||||||||||:||||.:|...|.||.::||......:| |..|
Worm   133 FADRSNLRAHLQTHSGEKKHRCSRCGQSFARVQVRQRH-EQCC 174

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
scrt	NP_001261390.1	zf-C2H2	467..489	CDD:278523	9/21 (43%)
		C2H2 Zn finger	469..489	CDD:275370	9/19 (47%)
		C2H2 Zn finger	500..520	CDD:275368	10/19 (53%)
		COG5048	520..>617	CDD:227381	50/84 (60%)
		C2H2 Zn finger	526..546	CDD:275368	15/19 (79%)
		zf-H2C2_2	539..562	CDD:290200	15/22 (68%)
		C2H2 Zn finger	554..574	CDD:275368	14/19 (74%)
		zf-C2H2	554..574	CDD:278523	14/19 (74%)
		zf-H2C2_2	566..590	CDD:290200	13/23 (57%)
		C2H2 Zn finger	582..599	CDD:275368	5/16 (31%)
snai-1	NP_499902.2	C2H2 Zn finger	72..92	CDD:275368	10/19 (53%)
		COG5048	98..>155	CDD:227381	40/56 (71%)
		C2H2 Zn finger	98..118	CDD:275368	15/19 (79%)
		C2H2 Zn finger	126..146	CDD:275368	14/19 (74%)
		zf-H2C2_2	138..163	CDD:290200	14/24 (58%)
		C2H2 Zn finger	154..170	CDD:275368	5/15 (33%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG2462
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810