DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrt and zbtb7c

DIOPT Version :9

Sequence 1:NP_001261390.1 Gene:scrt / 38469 FlyBaseID:FBgn0004880 Length:653 Species:Drosophila melanogaster
Sequence 2:XP_003200858.1 Gene:zbtb7c / 100537080 -ID:- Length:610 Species:Danio rerio


Alignment Length:408 Identity:80/408 - (19%)
Similarity:139/408 - (34%) Gaps:123/408 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 SPSCSPSGAGDRYSPLSSGQTSSERKCFSSTGATLSLPPKKKD-----IYRPYSLDDKPAHGYRR 261
            |||||.          ..|:..|:|....|..|..|..|:..:     ..:.:|::.....|...
Zfish   204 SPSCSS----------QKGRDESQRSQVGSPEAPQSDKPRAPEGLEGRALKDFSIESLLQEGLYP 258

  Fly   262 RVPAEEDLHAAHAILDLSASTAFHPPTQPHQLQQQQQQQQQQHQHHHSQQQHLAPQQHHYLPLQQ 326
            :||.            |.....|.|                           |.|  ..|.|:. 
Zfish   259 KVPG------------LERGAGFSP---------------------------LLP--GFYPPMW- 281

  Fly   327 QQQQQAHHTHLPTLEAHAHLRSTSSIAELAAAASVVNEQRPASNASSASSNHMPSSPSSNSSSSS 391
                                     .||......::..:||..|||      :.:.|.  ..:..
Zfish   282 -------------------------AAEFPGYPQILEPRRPFPNAS------LENGPL--DLAVK 313

  Fly   392 SQVQNENSNTTNTNP--DGDGCLQDGEHSGASGASAKTVAYTYEAFFVSDGRSKRKHVADPAAAA 454
            .:|..|......|||  :.| .|:|....|....:..::.      .:.:|...|.::...:|:.
Zfish   314 KEVIKEELKDEPTNPILNRD-FLKDFMSPGLGMTADPSLG------AIKEGTDLRSYLNFLSASH 371

  Fly   455 SGVPTPDQQKTKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCHTCGKAYVSMPALAMHLLT 519
            .|...|..|                      .:..|.:..:::::|..|.|.......|..|:.|
Zfish   372 LGTLFPPWQ----------------------LEEERKMKPKASQQCPICNKVIQGAGKLPRHMRT 414

  Fly   520 H--KLSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSVDKNFEC 582
            |  :..:.|.:|...|:|...|:.|:|.||||:||.|.||...|....:|:.|::.|:..:.::|
Zfish   415 HTGEKPYMCTICEVRFTRQDKLKIHMRKHTGERPYICLHCNSKFVHNYDLKNHLRIHTGVRPYQC 479

  Fly   583 KRCHKTFALKSYLNKHLE 600
            :.|:|:|....:|::|::
Zfish   480 EHCYKSFTRSDHLHRHIK 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scrtNP_001261390.1 zf-C2H2 467..489 CDD:278523 0/21 (0%)
C2H2 Zn finger 469..489 CDD:275370 0/19 (0%)
C2H2 Zn finger 500..520 CDD:275368 5/19 (26%)
COG5048 520..>617 CDD:227381 27/83 (33%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 539..562 CDD:290200 12/22 (55%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
zf-C2H2 554..574 CDD:278523 6/19 (32%)
zf-H2C2_2 566..590 CDD:290200 6/23 (26%)
C2H2 Zn finger 582..599 CDD:275368 5/16 (31%)
zbtb7cXP_003200858.1 BTB 24..132 CDD:279045
BTB 35..133 CDD:197585
C2H2 Zn finger 395..415 CDD:275368 5/19 (26%)
zf-H2C2_2 410..432 CDD:290200 6/21 (29%)
C2H2 Zn finger 423..443 CDD:275368 7/19 (37%)
zf-H2C2_2 436..460 CDD:290200 13/23 (57%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
zf-H2C2_2 463..488 CDD:290200 7/24 (29%)
C2H2 Zn finger 479..497 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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