DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and Scrt2

DIOPT Version :9

Sequence 1:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001153882.1 Gene:Scrt2 / 545474 MGIID:2139287 Length:311 Species:Mus musculus


Alignment Length:312 Identity:139/312 - (44%)
Similarity:181/312 - (58%) Gaps:51/312 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 SASSRSPQSTIRFIGSSSYDLMG-----GSSEGANNCSPLTPPNSDHSSDVDIDMSSSS----ES 343
            ||.:..|..|       :|.|.|     |.:....:|.|  |...|......::::.:.    .:
Mouse    21 SAPTYHPLET-------AYVLPGTRGPPGDNGYVAHCLP--PSGYDGEQKPGLELAPAEPAYPAA 76

  Fly   344 GLQQWGKPNPQQNQQRA------SALKMCLNM-----LDGRTKASKAAAVTKQDRQEPMQPRPKS 397
            ..:::..|...|:...|      :|:....:|     .|||::..:|.|            ...:
Mouse    77 ASEEYSDPESPQSSLSARYFRGEAAVTDSYSMDAFFISDGRSRRRRAGA------------GGDA 129

  Fly   398 AQSNASSGGGPPSEPPENPAASLGHSSSGNGENYAKRKRGCYKCCECGKQYATSSNLSRHKQTHR 462
            |.:..:.|||......|.  |....:::|.|..:|        |.||||.|||||||||||||||
Mouse   130 AGAGDAGGGGGGGGGGER--AGRSGATAGGGHRHA--------CAECGKTYATSSNLSRHKQTHR 184

  Fly   463 SLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACV 527
            |||||.|:||.|||||||||||||||:|||.|.|.|.:|||.||||||||||:||||||||:.|.
Mouse   185 SLDSQLARKCPTCGKAYVSMPALAMHVLTHNLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCA 249

  Fly   528 HCGKAFADRSNLRAHMQTHSGDKNFKCHRCNKTFALKSYLNKHLESACLRDA 579
            ||||||||||||||||||||..|:::|.:|:|:|||||||:||.|:||::.|
Mouse   250 HCGKAFADRSNLRAHMQTHSAFKHYRCRQCDKSFALKSYLHKHCEAACVKAA 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 17/21 (81%)
C2H2 Zn finger 441..461 CDD:275370 17/19 (89%)
C2H2 Zn finger 472..492 CDD:275368 17/19 (89%)
COG5048 492..>570 CDD:227381 57/77 (74%)
zf-C2H2 496..518 CDD:278523 16/21 (76%)
C2H2 Zn finger 498..518 CDD:275368 15/19 (79%)
zf-H2C2_2 511..534 CDD:290200 18/22 (82%)
zf-C2H2 524..546 CDD:278523 18/21 (86%)
C2H2 Zn finger 526..546 CDD:275368 18/19 (95%)
zf-H2C2_2 538..562 CDD:290200 14/23 (61%)
C2H2 Zn finger 554..571 CDD:275368 11/16 (69%)
Scrt2NP_001153882.1 SNAG domain. /evidence=ECO:0000250 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 71..90 2/18 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..156 8/49 (16%)
C2H2 Zn finger 163..183 CDD:275368 17/19 (89%)
COG5048 <216..>283 CDD:227381 49/66 (74%)
zf-C2H2 218..240 CDD:278523 16/21 (76%)
C2H2 Zn finger 220..240 CDD:275368 15/19 (79%)
zf-H2C2_2 233..256 CDD:290200 18/22 (82%)
C2H2 Zn finger 248..268 CDD:275368 18/19 (95%)
zf-H2C2_2 260..284 CDD:290200 14/23 (61%)
C2H2 Zn finger 276..292 CDD:275368 10/15 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837658
Domainoid 1 1.000 53 1.000 Domainoid score I11285
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000984
OrthoInspector 1 1.000 - - mtm8872
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1445
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.700

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