DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and Zfp398

DIOPT Version :9

Sequence 1:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001102700.1 Gene:Zfp398 / 500108 RGDID:1562129 Length:643 Species:Rattus norvegicus


Alignment Length:563 Identity:117/563 - (20%)
Similarity:195/563 - (34%) Gaps:154/563 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 EEQEDQLCEHLEWSAAQSLVQMNSSKQEKQRRAGTTGSPATVAAPVSASVSLRRPVGRAPAEDGK 179
            ||.:.:|.:::.....:||:.|:.:..:..                  .:|..:|.|....:|  
  Rat   161 EEWQKELYKNIMKGNYESLISMDYAMNQPD------------------VLSQIQPEGEHSTDD-- 205

  Fly   180 VIFYAPPASASGSPRQP--EPVA--------LKRERERD---KEREREKERERDRMREQQLVAAT 231
                .|...||..|..|  ||..        :|:|.|..   .:..:|.|..:....:::||  .
  Rat   206 ----QPRPEASEMPADPSEEPGLSTSDILSWIKQEEEPQVGVPQESKESELYKGTYADEELV--I 264

  Fly   232 AAASIYRGRSVEETEAAHDLLSLSQSLPPLIPPCVVTIMKQEQEQLRSPEIQEISNSASSRSPQS 296
            .|..:.|.....|...|.       |.||                           .|:::...|
  Rat   265 KAEDLARASLCPEVPVAF-------SAPP---------------------------PAAAKDTFS 295

  Fly   297 TIRFIGSSSYDLMGGSSEGANNCSPLTPPNSDHSSDVDIDMSSSSESGLQQWGK-PNPQQNQQRA 360
            .|.|              .:..|:|:.|..   .:..|:..:|..:....|.|. |.|....::.
  Rat   296 DIAF--------------KSQQCTPMAPFG---RTATDLPEASEGQVTFTQLGSYPLPPPVGEQV 343

  Fly   361 SALKMCLNMLDGRTKASKAAAVTKQDRQEPMQPR-----PKSAQSNASSGGGPPSEPPENP---- 416
            .:...|...|      |:...:|.|.......|.     ||.....|..|........|.|    
  Rat   344 FSCHHCGKNL------SQDMLMTHQCSHAAEHPLTCAQCPKHFTPQADLGSTSQDHANETPPTCP 402

  Fly   417 --AASLGHSS----SGNGENYAKRKRGCYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTC 475
              |.:..|.|    .....|..:|.   :.|.:|.|::|..:.|:.|::.|.   ::...:|..|
  Rat   403 HCARTFTHPSRLTYHLRVHNSTERP---FLCPDCPKRFADQARLTSHRRAHA---TERPFRCPQC 461

  Fly   476 GKAYVSMPALAMH------------------------LLTHKLSHS------CDICGKLFSRPWL 510
            |:::....:|.:|                        |:.|::.|:      |..|.|.|.|...
  Rat   462 GRSFSLKISLLLHQRGHAQERPFSCPQCGIDFNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEH 526

  Fly   511 LQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKNFKCHRCNKTFALKSYLNKHLESAC 575
            |..|.|.||||:|:.|.||||:|..:.:|..|.:.|:|::.:.|..|.::|..|..|..||.:. 
  Rat   527 LLNHRRLHTGERPFQCPHCGKSFIRKHHLMKHQRIHTGERPYPCAVCGRSFRYKQTLKDHLRTG- 590

  Fly   576 LRDAG-AIDQGKGLEEEDDDCSKQDELE---MGDELESDENSQ 614
             .:.| |.|:...::..|........||   :|...|..|:||
  Rat   591 -HNGGCAGDRDPSVQPPDPPGPLLTALETSGLGVSTEGLESSQ 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 6/21 (29%)
C2H2 Zn finger 441..461 CDD:275370 6/19 (32%)
C2H2 Zn finger 472..492 CDD:275368 6/43 (14%)
COG5048 492..>570 CDD:227381 30/83 (36%)
zf-C2H2 496..518 CDD:278523 9/27 (33%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
zf-H2C2_2 511..534 CDD:290200 13/22 (59%)
zf-C2H2 524..546 CDD:278523 8/21 (38%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 538..562 CDD:290200 6/23 (26%)
C2H2 Zn finger 554..571 CDD:275368 5/16 (31%)
Zfp398NP_001102700.1 KRAB 143..203 CDD:214630 9/59 (15%)
COG5048 <344..588 CDD:227381 61/255 (24%)
C2H2 Zn finger 346..365 CDD:275368 5/24 (21%)
C2H2 Zn finger 373..393 CDD:275368 4/19 (21%)
C2H2 Zn finger 401..421 CDD:275368 3/19 (16%)
C2H2 Zn finger 430..450 CDD:275368 6/19 (32%)
C2H2 Zn finger 458..478 CDD:275368 5/19 (26%)
C2H2 Zn finger 486..506 CDD:275368 2/19 (11%)
C2H2 Zn finger 514..534 CDD:275368 8/19 (42%)
C2H2 Zn finger 542..562 CDD:275368 8/19 (42%)
C2H2 Zn finger 570..589 CDD:275368 7/18 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4772
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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