DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and snai2

DIOPT Version :10

Sequence 1:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001008581.1 Gene:snai2 / 494038 ZFINID:ZDB-GENE-030326-6 Length:257 Species:Danio rerio


Alignment Length:201 Identity:89/201 - (44%)
Similarity:115/201 - (57%) Gaps:27/201 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 PMQPRPKSAQSNASSGGGPPSEPPENPAASLGHSSSGNGENYAKRKRG---------------CY 439
            |:.|.|    .:.|...|.||        ||..:||....:.::..|.               .:
Zfish    65 PLSPLP----HDLSPISGYPS--------SLSDTSSNKDHSGSESPRSDEDERIQSTKLSDAEKF 117

  Fly   440 KCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHSCDICGKL 504
            :|..|.|.|:|.|.|.:|||.|....|:.:..|..|.|.|||:.||.||:.||.|...|.:|||.
Zfish   118 QCGLCNKSYSTYSGLMKHKQLHCDAQSRKSFSCKYCEKEYVSLGALKMHIRTHTLPCVCKMCGKA 182

  Fly   505 FSRPWLLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKNFKCHRCNKTFALKSYLNK 569
            ||||||||||:|:||||||::|.||.:|||||||||||:||||..|.::|..|:|||:..|.|:|
Zfish   183 FSRPWLLQGHIRTHTGEKPFSCPHCSRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHK 247

  Fly   570 HLESAC 575
            |.||.|
Zfish   248 HEESGC 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 80/185 (43%)
zf-C2H2 439..461 CDD:395048 10/21 (48%)
C2H2 Zn finger 441..461 CDD:275370 10/19 (53%)
C2H2 Zn finger 472..492 CDD:275368 10/19 (53%)
zf-C2H2 496..518 CDD:395048 15/21 (71%)
C2H2 Zn finger 498..518 CDD:275368 15/19 (79%)
zf-H2C2_2 511..534 CDD:463886 15/22 (68%)
zf-C2H2 524..546 CDD:395048 15/21 (71%)
C2H2 Zn finger 526..546 CDD:275368 15/19 (79%)
zf-H2C2_2 538..562 CDD:463886 14/23 (61%)
C2H2 Zn finger 554..571 CDD:275368 8/16 (50%)
snai2NP_001008581.1 C2H2 Zn finger 119..139 CDD:275368 10/19 (53%)
C2H2 Zn finger 150..170 CDD:275368 10/19 (53%)
C2H2 Zn finger 176..196 CDD:275368 15/19 (79%)
zf-H2C2_2 189..212 CDD:463886 15/22 (68%)
zf-C2H2 202..224 CDD:395048 15/21 (71%)
C2H2 Zn finger 204..224 CDD:275368 15/19 (79%)
zf-H2C2_2 216..241 CDD:463886 15/24 (63%)
C2H2 Zn finger 232..248 CDD:275368 7/15 (47%)

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