DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and CG6813

DIOPT Version :10

Sequence 1:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster


Alignment Length:168 Identity:50/168 - (29%)
Similarity:67/168 - (39%) Gaps:11/168 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 PSEPPENPAASLGHSSS-GNGENYAKRKRGCYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKC 472
            ||....:...||.|..| |.|       .|.|.|.:||:.....||...|...|..:.:......
  Fly   118 PSAEKVSAPTSLNHQKSIGGG-------TGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFL 175

  Fly   473 NTCGKAYVSMPALAMHLLTH--KLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFAD 535
            | |.:::.:...|..|...|  :..:.|..|.:.||.....|.|.|.|..|:.|.|..|.|:|..
  Fly   176 N-CERSFATRKELTSHTRIHTGEQPYVCVYCPRRFSSSGARQEHHRRHRNERRYECDTCKKSFVS 239

  Fly   536 RSNLRAHMQTHSGDKNFKCHRCNKTFALKSYLNKHLES 573
            ...||.|...|...:|..|:.|.|.|...|:|..||.|
  Fly   240 SGCLRKHKMIHVDARNHYCYVCQKHFKRISHLMTHLSS 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 44/154 (29%)
zf-C2H2 439..461 CDD:395048 7/21 (33%)
C2H2 Zn finger 441..461 CDD:275370 6/19 (32%)
C2H2 Zn finger 472..492 CDD:275368 4/19 (21%)
zf-C2H2 496..518 CDD:395048 7/21 (33%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
zf-H2C2_2 511..534 CDD:463886 9/22 (41%)
zf-C2H2 524..546 CDD:395048 8/21 (38%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 538..562 CDD:463886 8/23 (35%)
C2H2 Zn finger 554..571 CDD:275368 6/16 (38%)
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262
C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
C2H2 Zn finger 172..194 CDD:275368 4/22 (18%)
UFD2 <256..>294 CDD:227443 9/22 (41%)
C2H2 Zn finger 258..280 CDD:275368 9/20 (45%)
Blue background indicates that the domain is not in the aligned region.

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