DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and snai2

DIOPT Version :10

Sequence 1:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_989424.1 Gene:snai2 / 395065 XenbaseID:XB-GENE-487371 Length:266 Species:Xenopus tropicalis


Alignment Length:198 Identity:93/198 - (46%)
Similarity:118/198 - (59%) Gaps:12/198 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 PMQPRPKSAQSNASSGGGPPSEPPENPAASLGHSSS----GNGENYAKRKRG--------CYKCC 442
            |..|...|..|...|..|..|.||::..:|..||.|    .:.|...:.|..        .::|.
 Frog    65 PPLPSDLSPLSGYPSSLGRVSPPPQSDTSSKDHSGSESPISDEEERLQTKLSDSHAIEAEKFQCS 129

  Fly   443 ECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHSCDICGKLFSR 507
            .|.|.|:|.|.|::|||.|....|:.:..|..|.|.|||:.||.||:.||.|...|.||||.|||
 Frog   130 LCSKTYSTFSGLAKHKQLHCDAQSRKSFSCKYCEKEYVSLGALKMHIRTHTLPCVCKICGKAFSR 194

  Fly   508 PWLLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKNFKCHRCNKTFALKSYLNKHLE 572
            |||||||:|:||||||::|.||.:|||||||||||:||||..|.::|..|:|||:..|.|:||.|
 Frog   195 PWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEE 259

  Fly   573 SAC 575
            |.|
 Frog   260 SGC 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 84/182 (46%)
zf-C2H2 439..461 CDD:395048 10/21 (48%)
C2H2 Zn finger 441..461 CDD:275370 10/19 (53%)
C2H2 Zn finger 472..492 CDD:275368 10/19 (53%)
zf-C2H2 496..518 CDD:395048 16/21 (76%)
C2H2 Zn finger 498..518 CDD:275368 16/19 (84%)
zf-H2C2_2 511..534 CDD:463886 15/22 (68%)
zf-C2H2 524..546 CDD:395048 15/21 (71%)
C2H2 Zn finger 526..546 CDD:275368 15/19 (79%)
zf-H2C2_2 538..562 CDD:463886 14/23 (61%)
C2H2 Zn finger 554..571 CDD:275368 8/16 (50%)
snai2NP_989424.1 C2H2 Zn finger 128..148 CDD:275370 10/19 (53%)
C2H2 Zn finger 159..179 CDD:275368 10/19 (53%)
C2H2 Zn finger 185..205 CDD:275368 16/19 (84%)
zf-H2C2_2 198..221 CDD:463886 15/22 (68%)
zf-C2H2 211..233 CDD:395048 15/21 (71%)
C2H2 Zn finger 213..233 CDD:275368 15/19 (79%)
zf-H2C2_2 225..250 CDD:463886 15/24 (63%)
C2H2 Zn finger 241..257 CDD:275368 7/15 (47%)

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