DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12605 and CG10654

DIOPT Version :10

Sequence 1:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster


Alignment Length:245 Identity:44/245 - (17%)
Similarity:84/245 - (34%) Gaps:85/245 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 WDPDDHAMDGLPDYLKSVVKFVFNTFQEFERKCKRSLRINLQVAKWVKAGHLPSFDEYLD----- 411
            |..|:|.  ..|..|.:|.:....| ..||||         :...|       .|||..|     
  Fly   443 WTSDEHG--DRPRPLPNVPELNMAT-DLFERK---------ESPSW-------DFDEGEDRWRWM 488

  Fly   412 ---VAGLELAISFTFAGILMGMENVCKPEAYEWLKSRDKLVRGVITKVRLLNDIFGYEDDMRRGY 473
               .|..:            .::||..||..:.|:...|.......:.|||.:   ::..:.:..
  Fly   489 KPPPASKK------------AVKNVLDPEERKLLREAIKSANPNTMRARLLKE---FKCQICQKV 538

  Fly   474 VTNSIN----------CYKKQYGVTEEEAIRKLHQIVADGEKMMNE--------------EFLKP 514
            :||.:.          |.:.::..|     ..:.:..:.|.|:.::              ||::.
  Fly   539 MTNPVTTPCAHNFCKACLESKFAGT-----ALVRERGSGGRKLRSQKSVMKCPCCPTDIAEFVQN 598

  Fly   515 INVPYQVPKVV-------------ILDTLRAANVSYEKDDEFTRPGEHLK 551
            ..|..:|.:|:             .||..:.:..|:|::|: .:|.:.:|
  Fly   599 PQVNREVAEVIEKLKKQEEEENAKSLDEGQCSGTSHEEEDD-EQPKKRIK 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 44/245 (18%)
zf-C2H2 439..461 CDD:395048 5/21 (24%)
C2H2 Zn finger 441..461 CDD:275370 5/19 (26%)
C2H2 Zn finger 472..492 CDD:275368 4/29 (14%)
zf-C2H2 496..518 CDD:395048 4/35 (11%)
C2H2 Zn finger 498..518 CDD:275368 4/33 (12%)
zf-H2C2_2 511..534 CDD:463886 6/35 (17%)
zf-C2H2 524..546 CDD:395048 6/34 (18%)
C2H2 Zn finger 526..546 CDD:275368 5/19 (26%)
zf-H2C2_2 538..562 CDD:463886 4/14 (29%)
C2H2 Zn finger 554..571 CDD:275368
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262
C2H2 Zn finger 228..248 CDD:275368
SFP1 <243..310 CDD:227516
C2H2 Zn finger 256..313 CDD:275368
SFP1 <287..376 CDD:227516
C2H2 Zn finger 289..314 CDD:275368
C2H2 Zn finger 325..345 CDD:275368
C2H2 Zn finger 355..376 CDD:275368
C2H2 Zn finger 385..405 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.