DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and Blimp-1

DIOPT Version :10

Sequence 1:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001261442.1 Gene:Blimp-1 / 38638 FlyBaseID:FBgn0035625 Length:1216 Species:Drosophila melanogaster


Alignment Length:784 Identity:181/784 - (23%)
Similarity:276/784 - (35%) Gaps:247/784 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 YVPGGSGSTLSSGSV--SASGAD------LQSWRRPKP---------------------RTSGKV 60
            ::|.|:|:..::|||  |.|||.      ....||..|                     |.:..:
  Fly   325 HLPVGAGNGPANGSVAGSVSGATPPPPTATPCCRRSSPPAHVSTTTSTCNAHHPHIQHGRHASVI 389

  Fly    61 KFDDKSPLTASSVLKNANGNGLGTGGKSPLKSLAKR------NSRSILKREIIDLDD--EDG--- 114
            ...|:||:.:|.  |:..|        |||..|..:      :.||:...|....::  |||   
  Fly   390 IGQDRSPMASSD--KDTAG--------SPLSGLDHQMTPQDGSVRSVRSDEGYHSNECHEDGLTP 444

  Fly   115 -EEQEDQLCEH---LEW-------------------SAAQSLVQMNSSKQEKQRRAGTTGSPA-- 154
             |:..|...||   |:.                   |:..::|..|::.......:..|.:|.  
  Fly   445 PEDSSDSESEHNYVLDCSKKAIAPKETVIAQAQKPSSSPPAVVMANTTTNSMISHSSPTATPICE 509

  Fly   155 ---------TVAAPVSASVSLRRPVGRAPA-------------EDGKVIFYAPPAS--ASGSPRQ 195
                     .|..|:......:..|.:.|:             |:...:.:..|.|  .|.:...
  Fly   510 TDKNEYRKFKVKMPLKYEFKNKTCVKQEPSLKEVDQEMSLPQEEEEDQVMHPEPDSICPSTTTHL 574

  Fly   196 PEPVALKRERERDKEREREKERERDRMR------------------------------------- 223
            .:...|..||||::||||.:|||....:                                     
  Fly   575 GDEHMLMMERERERERERIQEREPSNQQPASSTVIVLEHNSGGQARTIVPLSKPYYEPDPPGERY 639

  Fly   224 -----------------EQQLVAATAAASIYRGRS------VEETEAAHDLLSLSQSLPPLIPPC 265
                             :.:|.||.|||:..|..:      ...||.|:. ...||.....:.|.
  Fly   640 MRFGQPSSSILETILTSQHRLEAAAAAANACRQANAATPPPTSPTEMAYS-YKKSQRYGNAVSPD 703

  Fly   266 VVTIMKQEQEQLRSPEI----QEISNSA-----SSRSPQS----TIRFIGSSSYDLMGGSSEGAN 317
            ..:.:.|..|||.|..:    ||::.:.     .|..|.|    .:.|..|.....:|....|.:
  Fly   704 SSSNLGQNPEQLSSSAVVVGEQEMTRATMIKGECSPPPPSHHHHNVIFSPSRHAAYLGAGEAGGH 768

  Fly   318 NCSP----------------LTPPNSDHSSDVDIDMSSSSESGLQQWGKPNPQQNQQRASALKMC 366
            :.||                .:||:|.||   ..|..|::.||              ..||..  
  Fly   769 SPSPGYPGYPHYGAAATSTFHSPPHSSHS---PFDRQSNASSG--------------AGSATN-- 814

  Fly   367 LNMLDGRTKASK---AAAVTKQDRQEPMQPRPKSAQS---NASSGGGPPSEPPENPAASLGHSSS 425
            |::|...|:...   ...:|...|..|::..|.|:.|   |:....|.|..|  |..||.|:.|.
  Fly   815 LHLLQTSTQMLNHPLMQPLTPLQRLSPLRISPPSSLSPDGNSCPRSGSPLSP--NSLASRGYRSL 877

  Fly   426 GNGENY-AKRKRG--CYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALAM 487
                .| .|:|.|  .|:|..|.|.:...|||..|.:||   ..:...|||.|.|::..:..|..
  Fly   878 ----PYPLKKKDGKMHYECNVCCKTFGQLSNLKVHLRTH---SGERPFKCNVCTKSFTQLAHLQK 935

  Fly   488 HLLTH--KLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDK 550
            |.|.|  :..|.||||.|.||....|:.|||.|:|:|||||..|.:.|....:|:.|.:.|:.|:
  Fly   936 HHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACDLCPQKFTQFVHLKLHKRLHTNDR 1000

  Fly   551 NFKCHRCNKTFALKSYLNKHLESACLRDAGAIDQGKGLEEE------------DDDCSKQDELEM 603
            .:.|..|:|.:...|.|..|.::...:.       ..||||            |.|..:.|..|.
  Fly  1001 PYVCQGCDKKYISASGLRTHWKTTSCKP-------NNLEEELAMAAAATSECLDKDHPEPDSREA 1058

  Fly   604 GDEL 607
            .::|
  Fly  1059 YEQL 1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 91/313 (29%)
zf-C2H2 439..461 CDD:395048 8/21 (38%)
C2H2 Zn finger 441..461 CDD:275370 7/19 (37%)
C2H2 Zn finger 472..492 CDD:275368 7/19 (37%)
zf-C2H2 496..518 CDD:395048 12/21 (57%)
C2H2 Zn finger 498..518 CDD:275368 11/19 (58%)
zf-H2C2_2 511..534 CDD:463886 12/22 (55%)
zf-C2H2 524..546 CDD:395048 7/21 (33%)
C2H2 Zn finger 526..546 CDD:275368 5/19 (26%)
zf-H2C2_2 538..562 CDD:463886 7/23 (30%)
C2H2 Zn finger 554..571 CDD:275368 5/16 (31%)
Blimp-1NP_001261442.1 PR-SET_PRDM1 120..262 CDD:380964
zf-C2HE <871..912 CDD:465082 15/44 (34%)
C2H2 Zn finger 892..912 CDD:275368 7/19 (37%)
zf-H2C2_2 904..929 CDD:463886 10/27 (37%)
C2H2 Zn finger 920..940 CDD:275368 7/19 (37%)
SFP1 <938..1020 CDD:227516 32/81 (40%)
C2H2 Zn finger 948..968 CDD:275368 11/19 (58%)
C2H2 Zn finger 976..996 CDD:275368 5/19 (26%)
C2H2 Zn finger 1004..1023 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

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