DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and Scrt2

DIOPT Version :9

Sequence 1:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001178834.1 Gene:Scrt2 / 366229 RGDID:1564796 Length:305 Species:Rattus norvegicus


Alignment Length:296 Identity:134/296 - (45%)
Similarity:174/296 - (58%) Gaps:50/296 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 SSYDLMG-----GSSEGANNCSPLTPPNSDHSSDVDIDMSSSS----ESGLQQWGKPNPQQNQQR 359
            ::|.|.|     |.:....:|.|  |...|......::::.:.    .:..:::..|...|:...
  Rat    30 TAYVLPGTRGPPGDNGYVAHCMP--PSGYDGEQKPGLELAPTEPAYPAAASEEYSDPESPQSSLS 92

  Fly   360 A------SALKMCLNM-----LDGRTKASKAAAVTKQDRQEPMQPRPKSAQSNASSGGGPPSEPP 413
            |      :|:....:|     .|||::..:|.|              ....:.|..|||      
  Rat    93 ARYFRGEAAVTDSYSMDAFFISDGRSRRRRAGA--------------GGDAAGAGDGGG------ 137

  Fly   414 ENPAASLGHSSSGNGENYAKRKRGCYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKA 478
            ....|....:::|.|..:|        |.||||.||||||||||||||||||||.|:||.|||||
  Rat   138 GGERAGRSGATAGGGHRHA--------CAECGKTYATSSNLSRHKQTHRSLDSQLARKCPTCGKA 194

  Fly   479 YVSMPALAMHLLTHKLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHM 543
            ||||||||||:|||.|.|.|.:|||.||||||||||:||||||||:.|.||||||||||||||||
  Rat   195 YVSMPALAMHVLTHNLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHM 259

  Fly   544 QTHSGDKNFKCHRCNKTFALKSYLNKHLESACLRDA 579
            ||||..|:::|.:|:|:|||||||:||.|:||::.|
  Rat   260 QTHSAFKHYRCRQCDKSFALKSYLHKHCEAACVKAA 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 17/21 (81%)
C2H2 Zn finger 441..461 CDD:275370 17/19 (89%)
C2H2 Zn finger 472..492 CDD:275368 17/19 (89%)
COG5048 492..>570 CDD:227381 57/77 (74%)
zf-C2H2 496..518 CDD:278523 16/21 (76%)
C2H2 Zn finger 498..518 CDD:275368 15/19 (79%)
zf-H2C2_2 511..534 CDD:290200 18/22 (82%)
zf-C2H2 524..546 CDD:278523 18/21 (86%)
C2H2 Zn finger 526..546 CDD:275368 18/19 (95%)
zf-H2C2_2 538..562 CDD:290200 14/23 (61%)
C2H2 Zn finger 554..571 CDD:275368 11/16 (69%)
Scrt2NP_001178834.1 C2H2 Zn finger 157..177 CDD:275368 17/19 (89%)
COG5048 <210..>277 CDD:227381 49/66 (74%)
zf-C2H2 212..234 CDD:278523 16/21 (76%)
C2H2 Zn finger 214..234 CDD:275368 15/19 (79%)
zf-H2C2_2 227..250 CDD:290200 18/22 (82%)
C2H2 Zn finger 242..262 CDD:275368 18/19 (95%)
zf-C2H2 242..262 CDD:278523 18/19 (95%)
zf-H2C2_2 254..278 CDD:290200 14/23 (61%)
C2H2 Zn finger 270..286 CDD:275368 10/15 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341380
Domainoid 1 1.000 53 1.000 Domainoid score I11046
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1332418at2759
OrthoFinder 1 1.000 - - FOG0000984
OrthoInspector 1 1.000 - - mtm9118
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1445
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.710

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