DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12605 and Zfp324

DIOPT Version :9

Sequence 1:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_344863.6 Gene:Zfp324 / 365192 RGDID:1306631 Length:581 Species:Rattus norvegicus


Alignment Length:468 Identity:105/468 - (22%)
Similarity:170/468 - (36%) Gaps:152/468 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 REQQLVAATAAASIYRGRSVEETEAAHDLLSLSQSLPPLI--PPCVVTIMKQEQEQLRSPEIQEI 285
            :|:.:....|..::||...:|.       .:|..|:.|.:  |..::.:.:.|:..:.:..|...
  Rat    42 QEEWMFLNAAQRALYRHVMLEN-------FALVDSIGPSVSRPRVIIQLQRGEEPWVPNRTIAGP 99

  Fly   286 SNSASSRSPQSTIRFIGS--SSYDL-MGGSSEGANNCSP------LTPPNSDH------------ 329
            ......||.      :||  |:.|. :.|:|.||....|      |.||...:            
  Rat   100 GRGTHRRSS------LGSNYSARDRHVSGASPGATCDRPVRISTSLLPPAGAYPDAKILEGHQSA 158

  Fly   330 ------------------------SSDVDIDMSSSSESGLQQWGKPNPQQNQQRASALKMCLNML 370
                                    ||:..:.:..:|..|:       |:....|..|....|   
  Rat   159 CPSLQKKPTGVSVIYWEQLLLGSSSSEATVSLRLTSPVGV-------PENGSSRVKAFSDLL--- 213

  Fly   371 DGRTKASKAAAVTKQDRQEPMQPRP-----------KSAQSNASSGG-----GPPSEPPENPAAS 419
                ...|...|.:|.:.| ||..|           ::.:.:..||.     |.||.|.......
  Rat   214 ----APGKQLRVAEQQKPE-MQLNPGRTFQSIPDLHEAEEGHGISGACHESQGDPSVPEAPIWDE 273

  Fly   420 LGHSSSGNGENYAKRK----RGC----------------------YKCCECGKQYATSSNLSRHK 458
            ||.:.......::..|    |.|                      |:|.:|||.::.:|:|::|:
  Rat   274 LGEALQAGPGLFSGDKPFECRACNKVFVKSSDLLKHLRTHTGERPYECAQCGKAFSQTSHLTQHQ 338

  Fly   459 QTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHS--CDICGKLFS--------------- 506
            :.|   ..::...|..|.||:....:|..|...|.:..:  |:.|||.||               
  Rat   339 RIH---SGETPYVCMVCSKAFRHSSSLVRHQRIHTVEKTFHCNECGKAFSHGSNLSQHRKIHAGG 400

  Fly   507 RPW--------------LLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKNFKCHRC 557
            ||:              |:| |.|:|||||||||..||.||:..|:|..|.:.|:|:|.|.|.:|
  Rat   401 RPYACAQCGRRFCRNSHLIQ-HERTHTGEKPYACSLCGAAFSQGSSLFKHQRVHTGEKPFSCPQC 464

  Fly   558 NKTFALKSYLNKH 570
            .:.|:..|.|.:|
  Rat   465 GRAFSHSSNLTQH 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 8/21 (38%)
C2H2 Zn finger 441..461 CDD:275370 7/19 (37%)
C2H2 Zn finger 472..492 CDD:275368 6/19 (32%)
COG5048 492..>570 CDD:227381 38/108 (35%)
zf-C2H2 496..518 CDD:278523 12/52 (23%)
C2H2 Zn finger 498..518 CDD:275368 12/48 (25%)
zf-H2C2_2 511..534 CDD:290200 15/22 (68%)
zf-C2H2 524..546 CDD:278523 10/21 (48%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 538..562 CDD:290200 8/23 (35%)
C2H2 Zn finger 554..571 CDD:275368 6/17 (35%)
Zfp324XP_344863.6 KRAB 31..91 CDD:214630 10/55 (18%)
KRAB 31..70 CDD:279668 6/34 (18%)
zf-C2H2 291..313 CDD:278523 2/21 (10%)
C2H2 Zn finger 293..313 CDD:275368 2/19 (11%)
zf-H2C2_2 305..330 CDD:290200 5/24 (21%)
C2H2 Zn finger 321..341 CDD:275368 7/19 (37%)
COG5048 <328..533 CDD:227381 49/154 (32%)
zf-H2C2_2 333..358 CDD:290200 7/27 (26%)
C2H2 Zn finger 349..369 CDD:275368 6/19 (32%)
zf-H2C2_2 361..386 CDD:290200 8/24 (33%)
C2H2 Zn finger 377..397 CDD:275368 6/19 (32%)
zf-C2H2 403..425 CDD:278523 4/22 (18%)
C2H2 Zn finger 405..425 CDD:275368 4/20 (20%)
zf-H2C2_2 417..442 CDD:290200 17/25 (68%)
C2H2 Zn finger 433..453 CDD:275368 8/19 (42%)
zf-H2C2_2 445..470 CDD:290200 9/24 (38%)
C2H2 Zn finger 461..481 CDD:275368 6/17 (35%)
zf-H2C2_2 473..497 CDD:290200 2/5 (40%)
C2H2 Zn finger 489..509 CDD:275368
zf-H2C2_2 502..524 CDD:290200
C2H2 Zn finger 517..537 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4772
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.