DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12605 and CG1603

DIOPT Version :9

Sequence 1:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001260778.1 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster


Alignment Length:141 Identity:47/141 - (33%)
Similarity:69/141 - (48%) Gaps:12/141 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 YKCCECGKQYATSSNLSRHK-QTH--RSLDSQSAKKCNTCGKAYVSMPALAMHLLTH--KLSHSC 498
            |.|..|.:::....::.||| ::|  |.|      ||..|.|::.....|.:|.|.|  :..|.|
  Fly   448 YLCSFCPRRFDRHVDMDRHKLRSHFERKL------KCQYCEKSFAVDTDLKVHTLIHTGERPHVC 506

  Fly   499 DICGKLFSRPWLLQGHLRS-HTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKNFKCHRCNKTFA 562
            |||||.|....||..|:.. |...:||:|..|.|.|..:..|..|::.|...::.||..|:.||.
  Fly   507 DICGKTFRLKLLLDHHVNGVHLNIRPYSCNMCTKTFRKKFELANHIKGHLNIRDKKCEYCDATFY 571

  Fly   563 LKSYLNKHLES 573
            ..|.|::|..|
  Fly   572 DHSSLSRHRRS 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 6/22 (27%)
C2H2 Zn finger 441..461 CDD:275370 5/20 (25%)
C2H2 Zn finger 472..492 CDD:275368 6/19 (32%)
COG5048 492..>570 CDD:227381 29/80 (36%)
zf-C2H2 496..518 CDD:278523 11/22 (50%)
C2H2 Zn finger 498..518 CDD:275368 10/20 (50%)
zf-H2C2_2 511..534 CDD:290200 8/23 (35%)
zf-C2H2 524..546 CDD:278523 7/21 (33%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
zf-H2C2_2 538..562 CDD:290200 7/23 (30%)
C2H2 Zn finger 554..571 CDD:275368 6/16 (38%)
CG1603NP_001260778.1 MADF_DNA_bdg 202..287 CDD:287510
GT1 321..408 CDD:304916
C2H2 Zn finger 420..441 CDD:275368
COG5048 <424..583 CDD:227381 47/141 (33%)
C2H2 Zn finger 450..471 CDD:275368 5/20 (25%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
zf-H2C2_2 490..513 CDD:290200 11/22 (50%)
C2H2 Zn finger 506..527 CDD:275368 10/20 (50%)
C2H2 Zn finger 535..555 CDD:275368 6/19 (32%)
C2H2 Zn finger 563..583 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457078
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.