DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and wor

DIOPT Version :9

Sequence 1:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster


Alignment Length:498 Identity:147/498 - (29%)
Similarity:217/498 - (43%) Gaps:82/498 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 MNSSKQEKQRRAGTTGSPATVAAPVSASVSLRRPVGRAPAEDGKVIFYAPPASASGSPRQPEP-- 198
            ||.:|::..||..........|.|   .|..|..:.::.|..|...|..||......| :|||  
  Fly    72 MNQTKEQLARRIWEETREIARAFP---DVFTREEIAKSLARLGYGEFELPPEEEVMEP-EPEPEQ 132

  Fly   199 -VALKRERERD----KEREREKERERDRMREQQLVAATAAASIYRGRSVEETEAAHDLLSLSQSL 258
             :.|:..|:..    |....::|:...|.....|:           :|:.|.|....:.::.:.:
  Fly   133 HLPLRYTRDASPTIIKAEPSDEEQFPLRNYNNNLL-----------KSIAEYEDCMKMQNIKEEI 186

  Fly   259 PPLIPPCVVTIMKQEQEQLRSPEIQEISNS---ASSRSPQSTIRFIGSSSYDLMGGSSEGANNCS 320
            ||:..|   .:.......|..||...::..   :.:.:.|:..|.:.|..:        .|...:
  Fly   187 PPIPSP---QLFYPPPTPLAEPEDLSVTQRRVLSENMNLQNVARALLSMQH--------MAPQHA 240

  Fly   321 PLTPPNSDHSSDVDIDMSSSSESGLQQWGKPNPQQNQQRASA-------LKMCLNMLDGRTKASK 378
            |  ||         |||....|         |...||.:..:       .:.|     .:..|:.
  Fly   241 P--PP---------IDMEEDQE---------NQDINQLKIKSSNDLYYQCQQC-----NKCYATY 280

  Fly   379 AAAVTKQDRQEPMQPRPKSAQSNASSGGG--PPSEPPENPAASLGHSSSGNGENYAKRKRGC--Y 439
            |..|..|..........|..:|.....|.  ..:|...:.|::|..:::.......::..|.  |
  Fly   281 AGLVKHQQTHAYESTEYKIIRSQPGGSGAIVDQTEFCTDQASALIQAANVASAQSMQKPVGVPRY 345

  Fly   440 KCCECGKQYATSSNLSRHKQTH-RSLDSQSAKK---CNTCGKAYVSMPALAMHLLTHKLSHSCDI 500
            .|.:|||.|:|.|.||:|:|.| .|.:....||   |..|.|.|||:.||.||:.||.|...|.|
  Fly   346 HCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTHTLPCKCPI 410

  Fly   501 CGKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKNFKCHRCNKTFALKS 565
            |||.||||||||||:|:||||||::|.||.:||||||||||||||||..|.:.|..|.|:|:..|
  Fly   411 CGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMS 475

  Fly   566 YLNKHLESACL--RDAGAIDQGKGLEEEDDDCSKQDELEMGDE 606
            .|.|||:|.|.  :..|....|.|.:::    ..|..|::.:|
  Fly   476 LLAKHLQSGCQTEQSGGPSGSGGGFDQQ----QLQQHLQVYEE 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 12/21 (57%)
C2H2 Zn finger 441..461 CDD:275370 11/19 (58%)
C2H2 Zn finger 472..492 CDD:275368 10/19 (53%)
COG5048 492..>570 CDD:227381 50/77 (65%)
zf-C2H2 496..518 CDD:278523 16/21 (76%)
C2H2 Zn finger 498..518 CDD:275368 16/19 (84%)
zf-H2C2_2 511..534 CDD:290200 15/22 (68%)
zf-C2H2 524..546 CDD:278523 16/21 (76%)
C2H2 Zn finger 526..546 CDD:275368 16/19 (84%)
zf-H2C2_2 538..562 CDD:290200 14/23 (61%)
C2H2 Zn finger 554..571 CDD:275368 7/16 (44%)
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 5/24 (21%)
C2H2 Zn finger 317..334 CDD:275368 2/16 (13%)
zf-C2H2 345..367 CDD:278523 12/21 (57%)
C2H2 Zn finger 347..367 CDD:275368 11/19 (58%)
PHA00732 379..>417 CDD:177300 19/37 (51%)
C2H2 Zn finger 382..402 CDD:275368 10/19 (53%)
zf-C2H2_8 405..482 CDD:292531 50/76 (66%)
zf-C2H2 406..428 CDD:278523 16/21 (76%)
C2H2 Zn finger 408..428 CDD:275368 16/19 (84%)
zf-H2C2_2 421..444 CDD:290200 15/22 (68%)
zf-C2H2 434..456 CDD:278523 16/21 (76%)
C2H2 Zn finger 436..456 CDD:275368 16/19 (84%)
zf-H2C2_2 448..473 CDD:290200 15/24 (63%)
C2H2 Zn finger 464..481 CDD:275368 7/16 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457086
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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