Sequence 1: | NP_001261387.1 | Gene: | CG12605 / 38468 | FlyBaseID: | FBgn0035481 | Length: | 619 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_840101.1 | Gene: | SNAI3 / 333929 | HGNCID: | 18411 | Length: | 292 | Species: | Homo sapiens |
Alignment Length: | 284 | Identity: | 104/284 - (36%) |
---|---|---|---|
Similarity: | 140/284 - (49%) | Gaps: | 36/284 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 307 DLMGGSSEGANNCSPLTPPNSDHSSDVDIDMSSSSESGLQQWGKPN----------PQQNQQRAS 361
Fly 362 ALKMCLNMLDGRTKASKAAAVTKQDRQEPMQPRPKSAQSNASSGGGPPSEPPENPAASLGHSSSG 426
Fly 427 NGENYAKRKR-----GCYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALA 486
Fly 487 MHLLTHKLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKN 551
Fly 552 FKCHRCNKTFALKSYLNKHLESAC 575 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12605 | NP_001261387.1 | zf-C2H2 | 439..461 | CDD:278523 | 9/21 (43%) |
C2H2 Zn finger | 441..461 | CDD:275370 | 9/19 (47%) | ||
C2H2 Zn finger | 472..492 | CDD:275368 | 9/19 (47%) | ||
COG5048 | 492..>570 | CDD:227381 | 53/77 (69%) | ||
zf-C2H2 | 496..518 | CDD:278523 | 16/21 (76%) | ||
C2H2 Zn finger | 498..518 | CDD:275368 | 16/19 (84%) | ||
zf-H2C2_2 | 511..534 | CDD:290200 | 17/22 (77%) | ||
zf-C2H2 | 524..546 | CDD:278523 | 17/21 (81%) | ||
C2H2 Zn finger | 526..546 | CDD:275368 | 15/19 (79%) | ||
zf-H2C2_2 | 538..562 | CDD:290200 | 15/23 (65%) | ||
C2H2 Zn finger | 554..571 | CDD:275368 | 8/16 (50%) | ||
SNAI3 | NP_840101.1 | SNAG domain. /evidence=ECO:0000250 | 1..20 | ||
C2H2 Zn finger | 154..174 | CDD:275370 | 9/19 (47%) | ||
C2H2 Zn finger | 185..205 | CDD:275368 | 9/19 (47%) | ||
COG5048 | <206..>278 | CDD:227381 | 50/71 (70%) | ||
C2H2 Zn finger | 211..231 | CDD:275368 | 16/19 (84%) | ||
C2H2 Zn finger | 239..259 | CDD:275368 | 15/19 (79%) | ||
C2H2 Zn finger | 267..283 | CDD:275368 | 8/15 (53%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2462 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |