DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and SNAI3

DIOPT Version :9

Sequence 1:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_840101.1 Gene:SNAI3 / 333929 HGNCID:18411 Length:292 Species:Homo sapiens


Alignment Length:284 Identity:104/284 - (36%)
Similarity:140/284 - (49%) Gaps:36/284 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 DLMGGSSEGANNCSPLTPPNSDHSSDVDIDMSSSSESGLQQWGKPN----------PQQNQQRAS 361
            ::.|..|.......||.|.:.:..| |..|:.       |.|.:.:          |:..:...:
Human    26 EINGACSACGGLVVPLLPRDKEAPS-VPGDLP-------QPWDRSSAVACISLPLLPRIEEALGA 82

  Fly   362 ALKMCLNMLDGRTKASKAAAVTKQDRQEPMQPRPKSAQSNASSGGGPPSEPPENPAASLGHSSSG 426
            :....|.:.:...:||:||.|..:|....:...|....             |...:.:||....|
Human    83 SGLDALEVSEVDPRASRAAIVPLKDSLNHLNLPPLLVL-------------PTRWSPTLGPDRHG 134

  Fly   427 NGENYAKRKR-----GCYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALA 486
            ..|.....:|     |.::|..|.|.|.|.:.|:||:|.|..|.......|..|.|.|.|:.||.
Human   135 APEKLLGAERMPRAPGGFECFHCHKPYHTLAGLARHRQLHCHLQVGRVFTCKYCDKEYTSLGALK 199

  Fly   487 MHLLTHKLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKN 551
            ||:.||.|..:|.||||.||||||||||:|:|||||||||.||.:|||||||||||:||||..|.
Human   200 MHIRTHTLPCTCKICGKAFSRPWLLQGHVRTHTGEKPYACSHCSRAFADRSNLRAHLQTHSDAKK 264

  Fly   552 FKCHRCNKTFALKSYLNKHLESAC 575
            ::|.||.|||:..|.|.:|.||.|
Human   265 YRCRRCTKTFSRMSLLARHEESGC 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 9/21 (43%)
C2H2 Zn finger 441..461 CDD:275370 9/19 (47%)
C2H2 Zn finger 472..492 CDD:275368 9/19 (47%)
COG5048 492..>570 CDD:227381 53/77 (69%)
zf-C2H2 496..518 CDD:278523 16/21 (76%)
C2H2 Zn finger 498..518 CDD:275368 16/19 (84%)
zf-H2C2_2 511..534 CDD:290200 17/22 (77%)
zf-C2H2 524..546 CDD:278523 17/21 (81%)
C2H2 Zn finger 526..546 CDD:275368 15/19 (79%)
zf-H2C2_2 538..562 CDD:290200 15/23 (65%)
C2H2 Zn finger 554..571 CDD:275368 8/16 (50%)
SNAI3NP_840101.1 SNAG domain. /evidence=ECO:0000250 1..20
C2H2 Zn finger 154..174 CDD:275370 9/19 (47%)
C2H2 Zn finger 185..205 CDD:275368 9/19 (47%)
COG5048 <206..>278 CDD:227381 50/71 (70%)
C2H2 Zn finger 211..231 CDD:275368 16/19 (84%)
C2H2 Zn finger 239..259 CDD:275368 15/19 (79%)
C2H2 Zn finger 267..283 CDD:275368 8/15 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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