DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and zld

DIOPT Version :9

Sequence 1:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001285466.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster


Alignment Length:615 Identity:117/615 - (19%)
Similarity:209/615 - (33%) Gaps:163/615 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 LDDEDGEEQEDQLCEHLEWSAAQSLVQMNSSKQEKQRRAGTTGSPATVAAPVSAS--VSLRRPVG 171
            |..:.||:.:.|..:|.:  ..:.|.|::..:|::|........|.:.::|.|:|  .::..|:.
  Fly  1012 LHQQLGEQHQRQEADHHQ--QQRELHQLDQQQQQQQALILADSLPHSSSSPTSSSPPPTMPMPLT 1074

  Fly   172 RAPAEDGKVIFYAPPASASGSP---------RQPEPVALKRERERDKEREREKERERDRMREQQL 227
            ...|.....:...||...|..|         ..|.|...::.:..|           ..|....:
  Fly  1075 TITAPQLLPLQPPPPHITSTMPMPPTMHMPIMPPPPQCYQQLQPLD-----------PTMSYHTI 1128

  Fly   228 V-----AATAAASIYRGRSVEETEAAHDLL-----SLSQSLPPLIPPCVVTIMKQEQEQLRSPEI 282
            :     |.|..|.  .|.|.:.|.:...:|     ||.....||.|..|......::..|  |.:
  Fly  1129 IGSGPEAHTGTAG--GGYSNQITTSDGQILQLMPTSLFAPYAPLSPYSVAAQRSPQEGDL--PPV 1189

  Fly   283 QEISNS---------ASSRSPQSTIRFIGSSSYDLMGGSSEGANNCSPLTPPNSDHSSDVDIDMS 338
            ..::.:         ..:::|..|:.   |:.|.....||...............|..|.:::..
  Fly  1190 HTLTTALHAHQQGGQQEAQTPTLTVL---STPYSPTVSSSRATPALEMDMATLMQHHQDYEMEQY 1251

  Fly   339 SSSESGLQQWGKPNPQQNQQRASALKMCLNMLDGRTKASKAAAVTKQDRQEPMQPRPKSAQSNAS 403
            ......|.|.     ||:||:          ||.:.:....|..|:...|:|:..:.:       
  Fly  1252 QMQHQQLDQM-----QQHQQQ----------LDHQQQQQILADQTQTMAQQPLAKKRR------- 1294

  Fly   404 SGGGPPSEPPENPAASLGHSSSGNGENYAKRKRGCYKCCECGKQYATSSNLSRHKQTHRSLDSQS 468
            .|...||.......:|:|.:|    .:......|..||.||.|::..:..|::|.::..|  .:.
  Fly  1295 GGNATPSTTKRRRNSSVGSTS----PHSTTLPSGRIKCLECDKEFTKNCYLTQHNKSFHS--GEY 1353

  Fly   469 AKKCNTCGKAYVSMPALAMHLLTHKLS---HSCDICGKLFSRPWLLQGHLRS-HTGEKPYACVHC 529
            ..:|..|||.:.|......||..|:..   |.|::|.|.|.....|:.|:.: |||.|.:.|..|
  Fly  1354 PFRCQKCGKRFQSEDVYTTHLGRHRTQDKPHKCELCPKQFHHKTDLRRHVEAIHTGLKQHMCDIC 1418

  Fly   530 GKAFADRSNLRAHMQTHS-----GDKNFKC----------------------------------- 554
            .|.|..:.:||.|::||:     |.|:...                                   
  Fly  1419 EKGFCRKDHLRKHLETHNRPRVVGKKSAAAAAAAAAAAAVTATAGLGGAPAAGSIKAAFARSLTV 1483

  Fly   555 ---------------------------------HRCNKTFALKSYLNKHLESACLRDAGAIDQGK 586
                                             ...|.:......|.:|::..      |:|...
  Fly  1484 TAVSSEPGAGVAIPSAPATATCAPVSVSASALVQAVNPSLTSGLSLKRHIDDV------AVDDDS 1542

  Fly   587 GLEEEDDDCSKQDELEMGDELESDENSQDI 616
            .|||::|:...:.|::|.:  |.||..:::
  Fly  1543 LLEEDEDEMEMEMEMDMLE--EEDEEEEEL 1570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 7/21 (33%)
C2H2 Zn finger 441..461 CDD:275370 6/19 (32%)
C2H2 Zn finger 472..492 CDD:275368 7/19 (37%)
COG5048 492..>570 CDD:227381 25/154 (16%)
zf-C2H2 496..518 CDD:278523 7/22 (32%)
C2H2 Zn finger 498..518 CDD:275368 6/20 (30%)
zf-H2C2_2 511..534 CDD:290200 9/23 (39%)
zf-C2H2 524..546 CDD:278523 7/21 (33%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 538..562 CDD:290200 8/96 (8%)
C2H2 Zn finger 554..571 CDD:275368 2/84 (2%)
zldNP_001285466.1 zf-C2H2_jaz 552..577 CDD:288983
LIM 1328..1389 CDD:259829 17/62 (27%)
C2H2 Zn finger 1328..1349 CDD:275368 6/20 (30%)
C2H2 Zn finger 1357..1377 CDD:275368 7/19 (37%)
C2H2 Zn finger 1386..1407 CDD:275368 6/20 (30%)
zf-H2C2_2 1398..1422 CDD:290200 9/23 (39%)
zf-C2H2 1413..1435 CDD:278523 7/21 (33%)
C2H2 Zn finger 1415..1435 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457089
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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