Sequence 1: | NP_001261387.1 | Gene: | CG12605 / 38468 | FlyBaseID: | FBgn0035481 | Length: | 619 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008770833.1 | Gene: | Snai3 / 307919 | RGDID: | 1309658 | Length: | 328 | Species: | Rattus norvegicus |
Alignment Length: | 316 | Identity: | 103/316 - (32%) |
---|---|---|---|
Similarity: | 142/316 - (44%) | Gaps: | 70/316 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 307 DLMGGSSEGANNCSPLTPPNSDHSSDVDIDMSSSSESGLQQWGKPNPQQNQQRASALKMCLNMLD 371
Fly 372 GRTKASKAAAVTKQDRQEPMQP--------------RPKSAQSNASSGGGPPSEPPEN------- 415
Fly 416 ---PAASLGHS------------------SSGNGENYAK-----RKRGCYKCCECGKQYATSSNL 454
Fly 455 SRHKQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHSCDICGKLFSRPWLLQGHLRSHT 519
Fly 520 GEKPYACVHCGKAFADRSNLRAHMQTHSGDKNFKCHRCNKTFALKSYLNKHLESAC 575 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12605 | NP_001261387.1 | zf-C2H2 | 439..461 | CDD:278523 | 8/21 (38%) |
C2H2 Zn finger | 441..461 | CDD:275370 | 8/19 (42%) | ||
C2H2 Zn finger | 472..492 | CDD:275368 | 9/19 (47%) | ||
COG5048 | 492..>570 | CDD:227381 | 49/77 (64%) | ||
zf-C2H2 | 496..518 | CDD:278523 | 15/21 (71%) | ||
C2H2 Zn finger | 498..518 | CDD:275368 | 15/19 (79%) | ||
zf-H2C2_2 | 511..534 | CDD:290200 | 16/22 (73%) | ||
zf-C2H2 | 524..546 | CDD:278523 | 16/21 (76%) | ||
C2H2 Zn finger | 526..546 | CDD:275368 | 15/19 (79%) | ||
zf-H2C2_2 | 538..562 | CDD:290200 | 13/23 (57%) | ||
C2H2 Zn finger | 554..571 | CDD:275368 | 6/16 (38%) | ||
Snai3 | XP_008770833.1 | C2H2 Zn finger | 190..210 | CDD:275370 | 8/19 (42%) |
C2H2 Zn finger | 221..241 | CDD:275368 | 9/19 (47%) | ||
zf-C2H2 | 245..267 | CDD:278523 | 15/21 (71%) | ||
C2H2 Zn finger | 247..267 | CDD:275368 | 15/19 (79%) | ||
COG5048 | 250..>295 | CDD:227381 | 36/44 (82%) | ||
zf-H2C2_2 | 260..283 | CDD:290200 | 16/22 (73%) | ||
zf-C2H2 | 273..295 | CDD:278523 | 16/21 (76%) | ||
C2H2 Zn finger | 275..295 | CDD:275368 | 15/19 (79%) | ||
zf-H2C2_2 | 287..312 | CDD:290200 | 14/24 (58%) | ||
C2H2 Zn finger | 303..319 | CDD:275368 | 6/15 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2462 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |