DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12605 and Zfp641

DIOPT Version :9

Sequence 1:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001100262.1 Gene:Zfp641 / 300197 RGDID:1310412 Length:421 Species:Rattus norvegicus


Alignment Length:275 Identity:81/275 - (29%)
Similarity:115/275 - (41%) Gaps:52/275 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 IDMSSSSESGLQQWGKPNPQQNQQRASALKMCLNMLDGRTKASKAAAVTKQDR------QEPMQP 393
            :||....|.|.:|| .|:||..:.| ...|:......|..|.......|:..|      :|.:..
  Rat   142 LDMLPQLEGGEEQW-VPDPQDVEGR-DIRKVTYAGDGGEPKGDTPELETEPSRTLSSMSEETVLW 204

  Fly   394 RP---KSAQSNASSGGGPPSEPPENPAASLGH-SSSGNGENYAKRKRGCYKCCECGKQYATSSNL 454
            .|   .|.:|..||..|....|......|:.| ..|.:.::..|.    :.|.:||||:...|:|
  Rat   205 NPGQGPSWRSMPSSSTGTLPRPRFLQEDSVSHLLRSTDTDSLLKP----HTCPQCGKQFVWGSHL 265

  Fly   455 SRHKQTHRSLDSQSAKKC-NTCGKAYVSMPALAMHLLTHKLSH------SCDICGKLFSRPWLLQ 512
            :||:|||......|..|| .:.|:.:        ||:.|:.:|      .|..|||.|.....|.
  Rat   266 ARHQQTHTGERPYSCLKCEKSFGRRH--------HLIRHQKTHLHDKPSRCPECGKTFRCSSHLA 322

  Fly   513 GHLRSHT----------GEKP-----------YACVHCGKAFADRSNLRAHMQTHSGDKNFKCHR 556
            .|.|.|.          ||.|           :.|..|||:|..|.:|..|..||:|:|.|.|.|
  Rat   323 SHQRVHADSKSCKGQEIGESPGAQCAPPVPKCHVCTECGKSFGRRHHLVRHWLTHTGEKPFHCPR 387

  Fly   557 CNKTFALKSYLNKHL 571
            |.|:|..|.:|::||
  Rat   388 CEKSFGRKHHLDRHL 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 10/21 (48%)
C2H2 Zn finger 441..461 CDD:275370 10/19 (53%)
C2H2 Zn finger 472..492 CDD:275368 4/20 (20%)
COG5048 492..>570 CDD:227381 34/104 (33%)
zf-C2H2 496..518 CDD:278523 9/27 (33%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
zf-H2C2_2 511..534 CDD:290200 11/43 (26%)
zf-C2H2 524..546 CDD:278523 8/21 (38%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 538..562 CDD:290200 11/23 (48%)
C2H2 Zn finger 554..571 CDD:275368 7/16 (44%)
Zfp641NP_001100262.1 PLN03206 <13..90 CDD:178745
KRAB 95..156 CDD:214630 6/14 (43%)
COG5048 <208..402 CDD:227381 62/205 (30%)
C2H2 Zn finger 252..272 CDD:275368 10/19 (53%)
C2H2 Zn finger 280..300 CDD:275368 6/27 (22%)
C2H2 Zn finger 308..328 CDD:275368 8/19 (42%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..405 CDD:275368 9/18 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4772
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.