DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and Zfp212

DIOPT Version :9

Sequence 1:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_006236507.1 Gene:Zfp212 / 297066 RGDID:1307836 Length:492 Species:Rattus norvegicus


Alignment Length:427 Identity:92/427 - (21%)
Similarity:142/427 - (33%) Gaps:126/427 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 PPASASGSPRQPEPV----ALKRERERDKEREREKERERDRMRE--QQLVAATAAASIYRGRSVE 243
            ||.|...:|:...|:    ....|:|.:...:.:||..|:.|..  :.||:....     |:..|
  Rat   129 PPGSKGETPKVSGPLENDGVCFSEQEWENLEDWQKELYRNVMESNYETLVSLKVL-----GQPEE 188

  Fly   244 ETEAAHDLL-SLSQSLPPLIPPCVVTIMKQEQEQLRSPEIQEISNSASSRSPQSTIRFIGSSSYD 307
            |.|...::: .|.:....|....:|     :||.|...|                    |.|...
  Rat   189 EVELGAEMVGDLVEEGTHLADRAMV-----KQEMLYKQE--------------------GPSGLP 228

  Fly   308 LMGGSSEGANNCSPLTPPNSDHSSDVDIDMSSSSESGLQQWGKPNPQQNQQRASALKMCLNMLDG 372
            .|..|:         ..|.:...|:..:..:|..:|.|.:.|                       
  Rat   229 SMFSSA---------AEPQACFGSEQAVFWNSPGDSALLESG----------------------- 261

  Fly   373 RTKASKAAAVTKQDRQEPMQPRPKSAQSNASSGGGP----PSEPPENPAASLGHSSSGNGENYAK 433
                             |....|:|.:|:.....|.    |.:...:....|| ...|.|.. .|
  Rat   262 -----------------PGDSNPESVESSRDPAPGRNLDCPRKQKSHRQVQLG-QECGQGPK-VK 307

  Fly   434 RKRGCYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTHKLSHSC 498
            |....|||.||...:.....|:.|.|:|.|.:|.||.:..   ::....|.|.......|| |.|
  Rat   308 RDTSPYKCSECQISFRYKQQLTAHLQSHTSRESYSATEPE---ESLRPRPRLKPQAKRSKL-HQC 368

  Fly   499 DICGKLFSRPWLLQGHLRSHTGEKP------------------------------YACVHCGKAF 533
            |:|.:.||....|..|.|.|..|.|                              ..|.:|||:|
  Rat   369 DVCHRSFSCKVSLVTHQRCHQQEGPSTSPQIQERFSPNSLVALPGHIPWRKSRSSLICGYCGKSF 433

  Fly   534 ADRSNLRAHMQTHSGDKNFKCHRCNKTFALKSYLNKH 570
            :..|:|..|.:.|:|::.:.|..|.|:|..|.:|.:|
  Rat   434 SHPSDLVRHQRIHTGERPYSCPECEKSFVQKQHLLQH 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 8/21 (38%)
C2H2 Zn finger 441..461 CDD:275370 6/19 (32%)
C2H2 Zn finger 472..492 CDD:275368 2/19 (11%)
COG5048 492..>570 CDD:227381 30/107 (28%)
zf-C2H2 496..518 CDD:278523 9/21 (43%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
zf-H2C2_2 511..534 CDD:290200 10/52 (19%)
zf-C2H2 524..546 CDD:278523 8/21 (38%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 538..562 CDD:290200 7/23 (30%)
C2H2 Zn finger 554..571 CDD:275368 7/17 (41%)
Zfp212XP_006236507.1 KRAB_A-box 142..180 CDD:143639 9/37 (24%)
zf-C2H2 313..335 CDD:278523 8/21 (38%)
C2H2 Zn finger 315..335 CDD:275368 6/19 (32%)
COG5048 <329..>474 CDD:227381 40/146 (27%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
C2H2 Zn finger 426..446 CDD:275368 8/19 (42%)
zf-C2H2 426..446 CDD:278523 8/19 (42%)
zf-H2C2_2 438..463 CDD:290200 8/24 (33%)
C2H2 Zn finger 454..474 CDD:275368 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4772
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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