DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and Plagl2

DIOPT Version :10

Sequence 1:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001388738.1 Gene:Plagl2 / 296281 RGDID:1307999 Length:496 Species:Rattus norvegicus


Alignment Length:231 Identity:58/231 - (25%)
Similarity:96/231 - (41%) Gaps:45/231 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 KQDRQE--PMQPRPKSAQSNAS------------SGG---------GPPSEPPENPAASLGHSSS 425
            ||:.:.  .:.|||:..::.:.            |.|         .|...|...|....|.:.:
  Rat    16 KQEEEVGWKLVPRPRGREAESQVKCQCEISGTPFSNGEKLRPHSLPHPEQRPYSCPQLHCGKAFA 80

  Fly   426 GNGENY-------AKRKRGCYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMP 483
            ...:.|       |::.   ::|..|.|.:....:|..|.|||.  .::.|..|:.|||.|.:..
  Rat    81 SKYKLYRHMATHSAQKP---HQCMYCDKMFHRKDHLRNHLQTHD--PNKEALHCSECGKNYNTKL 140

  Fly   484 ALAMHLLTHKLSH---SCDICGKLFSRPWLLQGHLRSHT-------GEKPYACVHCGKAFADRSN 538
            ....||..|..|.   ||.:|.:.|.....|..||::|:       .||.:.|.||.:.|..|.:
  Rat   141 GYRRHLAMHAASSGDLSCKVCLQTFESTQALLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKD 205

  Fly   539 LRAHMQTHSGDKNFKCHRCNKTFALKSYLNKHLESA 574
            :|.|:..|:|.|:|.|..|.:.|..|.:|.:|::.:
  Rat   206 VRRHLVVHTGRKDFLCQYCAQRFGRKDHLTRHVKKS 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 54/216 (25%)
zf-C2H2 439..461 CDD:395048 6/21 (29%)
C2H2 Zn finger 441..461 CDD:275370 6/19 (32%)
C2H2 Zn finger 472..492 CDD:275368 7/19 (37%)
zf-C2H2 496..518 CDD:395048 7/24 (29%)
C2H2 Zn finger 498..518 CDD:275368 6/19 (32%)
zf-H2C2_2 511..534 CDD:463886 9/29 (31%)
zf-C2H2 524..546 CDD:395048 7/21 (33%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 538..562 CDD:463886 8/23 (35%)
C2H2 Zn finger 554..571 CDD:275368 5/16 (31%)
Plagl2NP_001388738.1 C2H2 Zn finger 42..62 CDD:275368 2/19 (11%)
C2H2 Zn finger 70..92 CDD:275368 3/21 (14%)
zf-H2C2_2 85..107 CDD:463886 5/24 (21%)
zf-C2H2 98..120 CDD:395048 6/21 (29%)
C2H2 Zn finger 100..120 CDD:275368 6/19 (32%)
C2H2 Zn finger 129..149 CDD:275368 7/19 (37%)
C2H2 Zn finger 158..178 CDD:275368 6/19 (32%)
C2H2 Zn finger 193..213 CDD:275368 7/19 (37%)
C2H2 Zn finger 221..239 CDD:275368 6/17 (35%)

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