DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and scrt2

DIOPT Version :10

Sequence 1:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_031750428.1 Gene:scrt2 / 116407977 XenbaseID:XB-GENE-29072462 Length:311 Species:Xenopus tropicalis


Alignment Length:235 Identity:127/235 - (54%)
Similarity:149/235 - (63%) Gaps:34/235 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 DGRTKASKAAAVTKQDRQEPMQPRPKSAQSNASSG--GGPPSEPPE--------NPAASLGHSSS 425
            :|:..:|......:||....    |.|.||:.|:|  .|..:....        :...|...|.|
 Frog    97 EGKFDSSDPDYTQEQDDYSD----PDSPQSSLSAGYFSGETAVTDSYSIDAFFISDGRSRRRSES 157

  Fly   426 GNGENYAKRKRGCYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLL 490
            ..|:.:.        |.||||.|||||||||||||||||||:.||||.||||.||||||||||:|
 Frog   158 RGGQRHI--------CSECGKTYATSSNLSRHKQTHRSLDSKMAKKCPTCGKTYVSMPALAMHIL 214

  Fly   491 THKLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKNFKCH 555
            ||.|.|.|::|.|.||||||||||:||||||||:.|.||||||||||||||||||||..|::||.
 Frog   215 THNLKHKCNVCSKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHYKCK 279

  Fly   556 RCNKTFALKSYLNKHLESACLRDAGAIDQGKGLEEEDDDC 595
            ||:||||||||||||.||||.:.:            |.:|
 Frog   280 RCDKTFALKSYLNKHYESACFKGS------------DHEC 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 110/199 (55%)
zf-C2H2 439..461 CDD:395048 17/21 (81%)
C2H2 Zn finger 441..461 CDD:275370 17/19 (89%)
C2H2 Zn finger 472..492 CDD:275368 16/19 (84%)
zf-C2H2 496..518 CDD:395048 15/21 (71%)
C2H2 Zn finger 498..518 CDD:275368 14/19 (74%)
zf-H2C2_2 511..534 CDD:463886 18/22 (82%)
zf-C2H2 524..546 CDD:395048 18/21 (86%)
C2H2 Zn finger 526..546 CDD:275368 18/19 (95%)
zf-H2C2_2 538..562 CDD:463886 17/23 (74%)
C2H2 Zn finger 554..571 CDD:275368 14/16 (88%)
scrt2XP_031750428.1 C2H2 Zn finger 165..185 CDD:275368 17/19 (89%)
C2H2 Zn finger 222..242 CDD:275368 14/19 (74%)
zf-H2C2_2 235..258 CDD:463886 18/22 (82%)
C2H2 Zn finger 250..270 CDD:275368 18/19 (95%)
zf-C2H2 250..270 CDD:395048 18/19 (95%)
C2H2 Zn finger 278..294 CDD:275368 13/15 (87%)

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