DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and LOC100488006

DIOPT Version :10

Sequence 1:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_002937452.2 Gene:LOC100488006 / 100488006 XenbaseID:XB-GENE-29079027 Length:383 Species:Xenopus tropicalis


Alignment Length:162 Identity:56/162 - (34%)
Similarity:80/162 - (49%) Gaps:33/162 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 YKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTH--KLSHSCDIC 501
            |.|.:|||::.:|:.|:.||:.|   ..:....|..|||::.|..:|.:|..||  :..:.|..|
 Frog   178 YPCPDCGKRFTSSATLTTHKRIH---TGERPYICWECGKSFTSNSSLFLHNRTHTGEKPYECKQC 239

  Fly   502 GKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFADR----------------------------SN 538
            ||.||....|..|.|:|||||||.|..|||:|.|.                            ||
 Frog   240 GKTFSCSSALVTHTRTHTGEKPYTCAECGKSFFDNSRLLKHQATHTGEWAYMCTICGKGFTCISN 304

  Fly   539 LRAHMQTHSGDKNFKCHRCNKTFALKSYLNKH 570
            |..|.::|:|::.|.|.:|.|:|...|||.:|
 Frog   305 LNVHQRSHTGERPFSCGQCGKSFTNNSYLVRH 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 51/151 (34%)
zf-C2H2 439..461 CDD:395048 9/21 (43%)
C2H2 Zn finger 441..461 CDD:275370 8/19 (42%)
C2H2 Zn finger 472..492 CDD:275368 7/19 (37%)
zf-C2H2 496..518 CDD:395048 9/21 (43%)
C2H2 Zn finger 498..518 CDD:275368 9/19 (47%)
zf-H2C2_2 511..534 CDD:463886 14/22 (64%)
zf-C2H2 524..546 CDD:395048 11/49 (22%)
C2H2 Zn finger 526..546 CDD:275368 10/47 (21%)
zf-H2C2_2 538..562 CDD:463886 9/23 (39%)
C2H2 Zn finger 554..571 CDD:275368 8/17 (47%)
LOC100488006XP_002937452.2 C2H2 Zn finger 124..144 CDD:275368
zf-H2C2_2 136..161 CDD:463886
C2H2 Zn finger 152..172 CDD:275368
COG5048 <177..327 CDD:227381 51/151 (34%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
C2H2 Zn finger 236..256 CDD:275368 9/19 (47%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 292..312 CDD:275368 4/19 (21%)
C2H2 Zn finger 320..340 CDD:275368 8/17 (47%)
zf-H2C2_2 332..357 CDD:463886 3/5 (60%)
C2H2 Zn finger 348..368 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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