DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12605 and zbtb18

DIOPT Version :9

Sequence 1:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001076421.1 Gene:zbtb18 / 100003157 ZFINID:ZDB-GENE-050419-73 Length:537 Species:Danio rerio


Alignment Length:539 Identity:125/539 - (23%)
Similarity:185/539 - (34%) Gaps:167/539 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 KREIIDLDDE---------------DGEEQ------EDQLCEHLEWSAAQSLVQMNS-----SKQ 141
            ||:|:.|:.:               :|:.|      ||.|       ||.|.:.|..     .|:
Zfish    59 KRDIVHLNSDIVTAPAFALLLEFMYEGKLQFKSLPVEDVL-------AAASYLHMYDIVKVCKKK 116

  Fly   142 EKQRRAGTTGSPATVAAPVSASVSLRRPVGRAPAEDGKVIFYAPPASASGSPRQPEPVALKRERE 206
            .||:        ||..|.     |.:|....:...|....|     |..||..:|....|.:..:
Zfish   117 LKQK--------ATAEAD-----STKREEDTSSCSDKVESF-----SEGGSTGRPATADLLQSDD 163

  Fly   207 RDKEREREKERERDRMREQQLVAATAAASIYRGRSVEETEAAHDLLSLSQSLPPLIPPCVVTIMK 271
            .|.|.:|:..:|...|..:                          |...::..|...|       
Zfish   164 EDMENKRDSPQEPGSMWMR--------------------------LPSDRTTSPTTSP------- 195

  Fly   272 QEQEQLRSPEIQEI-----SNSASSRSPQSTIRFIGSSSYD----------LMGGSSEG-ANN-- 318
             .:.:...|:..:.     |:|..|.|.:|......|:..|          |.||..|. |.|  
Zfish   196 -REAETHGPDAGKSPAGSPSSSTGSLSRRSAASRRVSADTDCVLDLSVKSSLGGGPGENIAGNPY 259

  Fly   319 -CSPLTPPN-----------SDHSSDVDIDMSSSSE---SGLQQWGKPNPQQN-------QQRAS 361
             ||.:||.:           .|..||.|..:|...|   ||:    |..|..|       .||..
Zfish   260 FCSSVTPDSLQSALVQVKVEKDTGSDDDELVSGDYEMEHSGV----KEPPSTNGTHLSLVAQRRL 320

  Fly   362 ALKMCLNMLDGRTKASKAAAVTKQDRQEPMQPRPKSAQSNASSGGGPPSEPPEN---PAASLGHS 423
            .|:..|:.|   .:||.|:.:.:.|         |....:....||......|.   .::.|.:.
Zfish   321 GLEAHLSAL---REASLASELERDD---------KGGDDDTDVLGGDSDRVQEAAGVESSLLPYV 373

  Fly   424 SSGNGENYAKRKRGCYKCCECGKQYATSSNLSRHKQTH-RSLDSQSAKKCNTCGKAYVSMPALAM 487
            ||..|..:.:    .:.|..|.|.:.:...|..|..|| |..:...||....     |::|    
Zfish   374 SSMLGAPHTQ----IFMCPLCNKVFPSPHILQIHLSTHFREQEGVRAKPAGD-----VNVP---- 425

  Fly   488 HLLTHKLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKNF 552
                     :|.||||.||..:.|:.|.|:|:|||||.|..|||:|....||..|...|:.:|..
Zfish   426 ---------TCSICGKTFSCMYTLKRHERTHSGEKPYTCTTCGKSFQYSHNLSRHAVVHTREKPH 481

  Fly   553 KCHRCNKTFALKSYLNKHL 571
            .|..|.:.|.....|.:|:
Zfish   482 ACKWCERRFTQSGDLYRHI 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 5/21 (24%)
C2H2 Zn finger 441..461 CDD:275370 5/19 (26%)
C2H2 Zn finger 472..492 CDD:275368 2/19 (11%)
COG5048 492..>570 CDD:227381 30/77 (39%)
zf-C2H2 496..518 CDD:278523 10/21 (48%)
C2H2 Zn finger 498..518 CDD:275368 10/19 (53%)
zf-H2C2_2 511..534 CDD:290200 13/22 (59%)
zf-C2H2 524..546 CDD:278523 9/21 (43%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 538..562 CDD:290200 7/23 (30%)
C2H2 Zn finger 554..571 CDD:275368 4/16 (25%)
zbtb18NP_001076421.1 BTB 14..110 CDD:279045 13/57 (23%)
BTB 25..110 CDD:197585 13/57 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..232 25/153 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..355 4/28 (14%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
COG5048 <388..>496 CDD:227381 40/125 (32%)
C2H2 Zn finger 427..447 CDD:275368 10/19 (53%)
zf-H2C2_2 440..462 CDD:290200 13/21 (62%)
C2H2 Zn finger 455..475 CDD:275368 8/19 (42%)
C2H2 Zn finger 483..501 CDD:275368 5/18 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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