DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14983 and AT2G24480

DIOPT Version :9

Sequence 1:NP_647843.1 Gene:CG14983 / 38466 FlyBaseID:FBgn0035479 Length:163 Species:Drosophila melanogaster
Sequence 2:NP_180024.1 Gene:AT2G24480 / 816984 AraportID:AT2G24480 Length:198 Species:Arabidopsis thaliana


Alignment Length:159 Identity:32/159 - (20%)
Similarity:59/159 - (37%) Gaps:44/159 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LHLP--KIVDLLKELQEQEKEIQEIILEESFASPEQRLAQLESVTSRMHLYHSRRGNILMSLQQE 64
            |.||  |..|:...||.|        |.:...|        |.::|::.....:|.....|.||.
plant    65 LKLPCFKPNDVFHRLQSQ--------LHDHVMS--------EQISSKIVEAQRQRSQSFYSQQQP 113

  Fly    65 LGKYEYFTLLVRHIAQTHSYLKSLNKA----LDFLYKVNICSIC-------DLKCE-PHGRHSMV 117
            |    :..:.|:...:.:|.:..::..    :|...:...|:||       :..|: |:      
plant   114 L----FMIVSVKLTQKVYSVVPCISSPSATDVDQEEESETCAICLENMSRSENYCQMPY------ 168

  Fly   118 SLRCGHLFGRHCINN-VLRESSRCPTCSR 145
               |.|.:...|:.. |:..::.||.|.:
plant   169 ---CKHCYHEGCVTKWVIGHNNSCPLCRK 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14983NP_647843.1 zf-RING_2 99..143 CDD:290367 11/52 (21%)
AT2G24480NP_180024.1 COG5540 <150..196 CDD:227827 12/54 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 42 1.000 Inparanoid score I2695
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.