DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14982 and fam110b

DIOPT Version :9

Sequence 1:NP_001261385.1 Gene:CG14982 / 38464 FlyBaseID:FBgn0035477 Length:773 Species:Drosophila melanogaster
Sequence 2:XP_002936153.1 Gene:fam110b / 100488510 XenbaseID:XB-GENE-961184 Length:370 Species:Xenopus tropicalis


Alignment Length:509 Identity:100/509 - (19%)
Similarity:171/509 - (33%) Gaps:187/509 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 MPTSHGFGRDGEEPLVLTENYRPISPPAEYAAKSGQAHNDRYRYNYQRSYSHSHEVP----NTGE 359
            |||         |.|......:|:||...:.:                      .||    |.|.
 Frog     1 MPT---------ETLQTGSMVKPVSPAVTFTS----------------------AVPLRILNKGP 34

  Fly   360 D----RSAPYPSGDFNINSHKSLPDLHTQISRHSPHSEILSC---------------CSRGNRSI 405
            |    :|.|.|      ....::..|....:::....|:::.               |....|::
 Frog    35 DYFRRQSEPNP------KRLSAVERLEADKAKYVKSQEVINAKQEPVKPAVLAKPPICPGAKRAL 93

  Fly   406 KSAGESSINRDSGGSSGHYTHRSEPCYKRERQR-EVAGSAAPASGTIKNCCTLVAATRRDSGSST 469
            .|......|.::         ::|.|.:||..: |:          :||  .:.::....:||:.
 Frog    94 SSPTMKMFNNNA---------KNESCVQRENLKLEI----------LKN--IINSSESSSTGSAH 137

  Fly   470 QHSANSYCGYVTPAGDYSGMGGGRNTECLDCRCKQDTTMGSDYLLNFTPTPEVPEAFQDDYTPTP 534
            :.|:.::....:.:.|                            ||       ..:|.:.....|
 Frog   138 KQSSRNWPPNRSDSAD----------------------------LN-------RHSFAESLKVYP 167

  Fly   535 PSPRLKTQT---PRYSSS--SSQQLHTSSQGYTSINHSQSSLVQSPGSAPSVDDI----SPPPIQ 590
                  |||   |:.|:|  |.:.|..::..:..::|| ||.::...|...:..|    |.||  
 Frog   168 ------TQTHSSPQDSNSNISRRFLEKTTNTFLHVSHS-SSDIRKVTSVKQIKAIPCSSSAPP-- 223

  Fly   591 FKRQRCIRFKNRNRLPVQGEMGGPPGSGGGLVAPGSGGMGTASGVLAAYKQHRGSVDHENVFFPK 655
                          ||.:.::.  |.|  .|.:|.:..:.:..||.......|...|..:.:|..
 Frog   224 --------------LPPKPKLA--PLS--TLKSPENDNLDSGCGVSRRPSLQRSKSDLSDRYFRV 270

  Fly   656 GFSSEVYHNSLDMEREALNASISELEKFFDRLGLND--EAFHEIYSQPRRHHS--ETD-DASDDS 715
            ....|.:.|...::.|       ||||    ||:.:  .|..:|.|...|..|  .:| :.|.||
 Frog   271 DADVERFFNYCGLDPE-------ELEK----LGMENFTRANSDIISLNFRSASMISSDCEQSQDS 324

  Fly   716 STVFFSDVSTVDSMRLPDSTETQPQATQAYRPSEPPSIVERNARIIKWLCNCKK 769
            ::...:|.|..|  |:|...                |.:||||||||||.:.|:
 Frog   325 NSDLRNDDSAND--RVPYGI----------------SAIERNARIIKWLYSIKQ 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14982NP_001261385.1 FAM110_C 663..770 CDD:290865 34/112 (30%)
fam110bXP_002936153.1 FAM110_N 13..118 CDD:404949 21/141 (15%)
FAM110_C 253..361 CDD:404948 38/137 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 40 1.000 Domainoid score I12329
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326385at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.