DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sc2 and tecrl2a

DIOPT Version :9

Sequence 1:NP_647836.2 Gene:Sc2 / 38457 FlyBaseID:FBgn0035471 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_001339046.3 Gene:tecrl2a / 798606 ZFINID:ZDB-GENE-131121-138 Length:311 Species:Danio rerio


Alignment Length:314 Identity:151/314 - (48%)
Similarity:203/314 - (64%) Gaps:23/314 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ELEILNAKNSKP---YGKVKVPSGATPIGDLRALIHKTLKQTPHANRQSLRLELKGKSLKDTDTL 63
            |:|||::|..:.   ..||:..|.   |||:::|.||:..:. :..||:|||:.|.|:|:|.|.|
Zfish     8 EVEILDSKTKEQLCFLDKVEPHSS---IGDIKSLFHKSYPKW-YPARQALRLDPKNKALRDDDIL 68

  Fly    64 ESLSLRSGDKIYVKDLGPQIGWKTVFLAEYAGPLIVYLIFYFRPELVYGKAASLPISLTTH---- 124
            ::|...:...:|.:|||||:||..||||||.|||::||:||.|...:|....:...|  ||    
Zfish    69 QNLPAGTSVTMYFRDLGPQLGWTMVFLAEYIGPLLIYLLFYVRVPYIYNHKYTFTSS--THPVVS 131

  Fly   125 IAAGCYTVHYVKRLLETIFVHRFSHATMPLRNLFKNCTYYWGFTAYVSYHVNHPQFTSPCMCTVW 189
            :|..|::.||:|||.||||||||||.|||||.:.|||.|||||.|:::|::|||.:|.|.    :
Zfish   132 LACACHSFHYIKRLFETIFVHRFSHGTMPLRAIVKNCVYYWGFAAWLAYYINHPLYTPPS----Y 192

  Fly   190 G------ALGAFALCELGNFSVHIALRNLRPPGTKVRKIPVADGNPLTKLFDLVSCPNYTYEIGA 248
            |      ||..|.|||.||||:|.:|.:|:..|:|.|:.|....||.|.||..|||||||||:||
Zfish   193 GEIQVNYALIIFVLCEAGNFSIHWSLNSLKCEGSKCRRFPHPSKNPFTWLFFFVSCPNYTYEVGA 257

  Fly   249 WVSFSVLTSCLAAYLFAFAGAFQMTIWALAKHRNYKKEFKDYPRQRRSIFPFVL 302
            ||..|::|.|:...||.|.|..||||||..||:.|.:|||:||..|..|.||:|
Zfish   258 WVGLSIMTQCVPVALFTFVGFIQMTIWAKGKHQIYVREFKNYPNLRMPILPFIL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sc2NP_647836.2 Tsc13_N 3..79 CDD:176396 26/78 (33%)
PLN02560 15..299 CDD:178174 143/293 (49%)
PEMT 150..302 CDD:304400 81/157 (52%)
tecrl2aXP_001339046.3 Tsc13_N 9..84 CDD:176396 26/78 (33%)
PLN02560 26..308 CDD:178174 142/291 (49%)
PEMT 158..311 CDD:304400 81/156 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579024
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53957
OrthoDB 1 1.010 - - D537031at33208
OrthoFinder 1 1.000 - - FOG0001630
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10556
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2319
SonicParanoid 1 1.000 - - X1032
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.850

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