DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sc2 and MGC146850

DIOPT Version :9

Sequence 1:NP_647836.2 Gene:Sc2 / 38457 FlyBaseID:FBgn0035471 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_031756085.1 Gene:MGC146850 / 780081 XenbaseID:XB-GENE-5871338 Length:330 Species:Xenopus tropicalis


Alignment Length:313 Identity:157/313 - (50%)
Similarity:205/313 - (65%) Gaps:21/313 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ELEILNAKNSKP---YGKVKVPSGATPIGDLRALIHKTLKQTPHANRQSLRLELKGKSLKDTDTL 63
            |:|||:.|..:.   :.||: |.  ..:.|::.:.||...|. :..|||:||:.||:||||.:.|
 Frog    27 EVEILDCKTMRQLCFFDKVE-PH--LTVNDVKLMFHKCYPQW-YPARQSIRLDPKGRSLKDEEIL 87

  Fly    64 ESLSLRSGDKIYVKDLGPQIGWKTVFLAEYAGPLIVYLIFYFRPELVYGKAASLPIS--LTTHIA 126
            :.|.:.:...:|.:||||||||..|||.||||||.||.:||||....||.|.:...|  ...|:|
 Frog    88 QDLPVGTTATLYFRDLGPQIGWTMVFLTEYAGPLFVYFLFYFRMPFFYGLAKAFTSSSHSVVHLA 152

  Fly   127 AGCYTVHYVKRLLETIFVHRFSHATMPLRNLFKNCTYYWGFTAYVSYHVNHPQFTSP-------C 184
            ..|::.||:|||:||||||||||.|||||::.|||.|||||.|:::|::|||.:|.|       |
 Frog   153 CCCHSFHYIKRLIETIFVHRFSHGTMPLRSIVKNCFYYWGFAAWLAYYINHPLYTPPSYGKKQIC 217

  Fly   185 MCTVWGALGAFALCELGNFSVHIALRNLRPPGTKVRKIPVADGNPLTKLFDLVSCPNYTYEIGAW 249
            :     |:..|.:||.||||:|:||.|||..|.:.|:||....||.|.||..|||||||||:|:|
 Frog   218 L-----AMIMFLICETGNFSIHVALSNLRQDGLRSRRIPFPTRNPFTWLFFFVSCPNYTYEVGSW 277

  Fly   250 VSFSVLTSCLAAYLFAFAGAFQMTIWALAKHRNYKKEFKDYPRQRRSIFPFVL 302
            :||:|:|.|:...||...|..||||||..||..|.||||||||.|.||.||:|
 Frog   278 ISFTVMTQCVPVGLFTLIGFIQMTIWAKEKHYRYLKEFKDYPRLRMSIIPFLL 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sc2NP_647836.2 Tsc13_N 3..79 CDD:176396 25/78 (32%)
PLN02560 15..299 CDD:178174 149/292 (51%)
PEMT 150..302 CDD:304400 85/158 (54%)
MGC146850XP_031756085.1 PLN02560 45..329 CDD:178174 149/292 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 198 1.000 Domainoid score I3030
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 323 1.000 Inparanoid score I2464
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D537031at33208
OrthoFinder 1 1.000 - - FOG0001630
OrthoInspector 1 1.000 - - otm49103
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1032
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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