DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sc2 and tecra

DIOPT Version :9

Sequence 1:NP_647836.2 Gene:Sc2 / 38457 FlyBaseID:FBgn0035471 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_001921351.1 Gene:tecra / 566085 ZFINID:ZDB-GENE-090930-1 Length:346 Species:Danio rerio


Alignment Length:315 Identity:155/315 - (49%)
Similarity:206/315 - (65%) Gaps:25/315 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ELEILNAKNSKPYGKV----KVPSGATPIGDLRALIHKTLKQTPH--ANRQSLRLELKGKSLKDT 60
            |:|||:.|..:   |:    ||...|| |.|::::.||:   .||  ..||||.|:.|||.|||.
Zfish    43 EVEILDVKTRE---KLLLLDKVEPTAT-ILDIKSMFHKS---NPHWYPARQSLCLDPKGKPLKDE 100

  Fly    61 DTLESLSLRSGDKIYVKDLGPQIGWKTVFLAEYAGPLIVYLIFYFRPELVYGKAASLPIS--LTT 123
            |.|:.|.:.:....|.:|||.||.|.||||.|..|||::||:||||..|:|........|  |..
Zfish   101 DILQELPVGTTATFYFRDLGAQIAWGTVFLIECIGPLVLYLLFYFRLPLIYAPKYDFTASKHLVV 165

  Fly   124 HIAAGCYTVHYVKRLLETIFVHRFSHATMPLRNLFKNCTYYWGFTAYVSYHVNHPQFTSPCMCTV 188
            |||..|:|.||.||::||:|||||||.|||.||:||||.|:|.|.|:::|::|||.:|:|    .
Zfish   166 HIACACHTFHYAKRIMETLFVHRFSHGTMPFRNIFKNCIYHWCFAAWMAYYINHPLYTTP----Y 226

  Fly   189 WG------ALGAFALCELGNFSVHIALRNLRPPGTKVRKIPVADGNPLTKLFDLVSCPNYTYEIG 247
            :|      |||.|..|:||:||:|:|||:|:.||:|.:|||....||.|.:|.||||||||||:|
Zfish   227 YGEKQVKTALGIFLFCQLGSFSIHMALRSLKLPGSKTKKIPYPTKNPFTWIFALVSCPNYTYEVG 291

  Fly   248 AWVSFSVLTSCLAAYLFAFAGAFQMTIWALAKHRNYKKEFKDYPRQRRSIFPFVL 302
            :|:.|:::|.|:....|...|..|||:||..|||:|.||||:||..|..|.||||
Zfish   292 SWLGFTLMTQCVPVLFFTVVGFIQMTVWAKGKHRSYLKEFKEYPTLRSPILPFVL 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sc2NP_647836.2 Tsc13_N 3..79 CDD:176396 30/81 (37%)
PLN02560 15..299 CDD:178174 146/297 (49%)
PEMT 150..302 CDD:304400 80/157 (51%)
tecraXP_001921351.1 Tsc13_N 44..119 CDD:176396 30/81 (37%)
PLN02560 61..343 CDD:178174 144/289 (50%)
PEMT 193..346 CDD:304400 80/156 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579026
Domainoid 1 1.000 203 1.000 Domainoid score I2917
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 332 1.000 Inparanoid score I2412
OMA 1 1.010 - - QHG53957
OrthoDB 1 1.010 - - D537031at33208
OrthoFinder 1 1.000 - - FOG0001630
OrthoInspector 1 1.000 - - otm25337
orthoMCL 1 0.900 - - OOG6_102127
Panther 1 1.100 - - O PTHR10556
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1032
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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