DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sc2 and Tecrl

DIOPT Version :9

Sequence 1:NP_647836.2 Gene:Sc2 / 38457 FlyBaseID:FBgn0035471 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001102330.1 Gene:Tecrl / 364134 RGDID:1304608 Length:361 Species:Rattus norvegicus


Alignment Length:306 Identity:121/306 - (39%)
Similarity:182/306 - (59%) Gaps:8/306 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ELEILNAKNSKPYGKVKVPSGATPIGDLRALIHKTLKQTPHANRQSLRLELKGKSLKDTDTLESL 66
            |:|||:|...|....|...:..:.|.|::...||...:. :.:|..|:||..|..|||..|::|:
  Rat    59 EIEILDAHTRKQICIVDKVTQTSTIYDVKQKFHKACPKW-YPSRIGLQLEYGGPYLKDYITIQSV 122

  Fly    67 SLRSGDKIYVKDLGPQIGWKTVFLAEYAGPLIVYLIFYFRPELVYGKAASL--PISLTTHIAAGC 129
            :..|...:|..|||.|:||.|||||||:|||::||:||.|...:|....|.  |.....|:|..|
  Rat   123 AASSIITLYFTDLGQQVGWTTVFLAEYSGPLLIYLLFYLRSSYIYDVKESFRWPRHTVVHLACFC 187

  Fly   130 YTVHYVKRLLETIFVHRFSHATMPLRNLFKNCTYYWGFTAYVSYHVNHPQFTSPCMCT---VWGA 191
            :.:||::.||||:|||:.|....|::||.|.|.:|||||::::|::|||::|.|....   :..|
  Rat   188 HCIHYIRLLLETLFVHKVSTGHSPMKNLIKGCAFYWGFTSWMAYYINHPRYTPPSFGNRQIIVSA 252

  Fly   192 LGAFALCELGNFSVHIALRNLRPPGTKVRKIPVADGNPLTKLFDLVSCPNYTYEIGAWVSFSVLT 256
            :. |.:||.||..::..|.:....|:.. ..|....||.|.:|.||||||||||||.|:||:::|
  Rat   253 IN-FLMCEAGNHFINTVLAHPSHTGSNA-CFPSPTYNPFTWMFFLVSCPNYTYEIGTWISFTIMT 315

  Fly   257 SCLAAYLFAFAGAFQMTIWALAKHRNYKKEFKDYPRQRRSIFPFVL 302
            ..|...:|......||::||..||:.|:|:|..|..::.:|.||:|
  Rat   316 QTLPVGIFTMLMTIQMSLWARKKHKIYRKKFNSYVHRKSAIIPFIL 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sc2NP_647836.2 Tsc13_N 3..79 CDD:176396 22/75 (29%)
PLN02560 15..299 CDD:178174 112/288 (39%)
PEMT 150..302 CDD:304400 60/154 (39%)
TecrlNP_001102330.1 UBQ 60..135 CDD:294102 22/75 (29%)
PLN02560 77..361 CDD:178174 113/286 (40%)
PEMT 210..361 CDD:304400 60/152 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339324
Domainoid 1 1.000 133 1.000 Domainoid score I4926
eggNOG 1 0.900 - - E1_KOG1639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 328 1.000 Inparanoid score I2377
OMA 1 1.010 - - QHG53957
OrthoDB 1 1.010 - - D537031at33208
OrthoFinder 1 1.000 - - FOG0001630
OrthoInspector 1 1.000 - - otm46017
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10556
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1032
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.870

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