DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sc2 and tecrb

DIOPT Version :9

Sequence 1:NP_647836.2 Gene:Sc2 / 38457 FlyBaseID:FBgn0035471 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_021335340.1 Gene:tecrb / 326954 ZFINID:ZDB-GENE-030131-5154 Length:348 Species:Danio rerio


Alignment Length:313 Identity:165/313 - (52%)
Similarity:213/313 - (68%) Gaps:21/313 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ELEILNAKNSKPYGKV----KVPSGATPIGDLRALIHKTLKQTPHANRQSLRLELKGKSLKDTDT 62
            |:|||:||..   .|:    ||...|| ||:::::.||:..|. :..|||:||:.|||||||.|.
Zfish    45 EVEILDAKTK---DKLCFLDKVEPNAT-IGEIKSMFHKSHPQW-YPARQSIRLDPKGKSLKDEDV 104

  Fly    63 LESLSLRSGDKIYVKDLGPQIGWKTVFLAEYAGPLIVYLIFYFRPELVYGKAASLPIS--LTTHI 125
            |:.|.:.:....|.:|||.||.|.||||.||||||::||:||||...:|........|  ...|:
Zfish   105 LQHLPVGTTATFYFRDLGAQISWVTVFLTEYAGPLLIYLMFYFRVPFIYAPKYDFTTSKHWVVHL 169

  Fly   126 AAGCYTVHYVKRLLETIFVHRFSHATMPLRNLFKNCTYYWGFTAYVSYHVNHPQFTSPCMCTVWG 190
            |..|::.|||||||||:|||||||.||||||:||||||||||.|:::|::|||.:|.|    ::|
Zfish   170 ACMCHSFHYVKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPLYTPP----IYG 230

  Fly   191 ------ALGAFALCELGNFSVHIALRNLRPPGTKVRKIPVADGNPLTKLFDLVSCPNYTYEIGAW 249
                  ||..|..|::||||:|||||||||||:|.||||....||.|.:|.||||||||||:|:|
Zfish   231 EQQIRLALTVFLFCQIGNFSIHIALRNLRPPGSKTRKIPYPTKNPFTWIFLLVSCPNYTYELGSW 295

  Fly   250 VSFSVLTSCLAAYLFAFAGAFQMTIWALAKHRNYKKEFKDYPRQRRSIFPFVL 302
            :.|:::|.||....|...|..|||:||..|||:|.|||:|||..|..|.||:|
Zfish   296 LGFTLMTQCLPVAFFTLVGFIQMTVWAKGKHRSYLKEFRDYPTLRSPILPFIL 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sc2NP_647836.2 Tsc13_N 3..79 CDD:176396 31/79 (39%)
PLN02560 15..299 CDD:178174 156/295 (53%)
PEMT 150..302 CDD:304400 89/157 (57%)
tecrbXP_021335340.1 PLN02560 63..345 CDD:178174 154/287 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579027
Domainoid 1 1.000 203 1.000 Domainoid score I2917
eggNOG 1 0.900 - - E1_KOG1639
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H36231
Inparanoid 1 1.050 332 1.000 Inparanoid score I2412
OMA 1 1.010 - - QHG53957
OrthoDB 1 1.010 - - D537031at33208
OrthoFinder 1 1.000 - - FOG0001630
OrthoInspector 1 1.000 - - otm25337
orthoMCL 1 0.900 - - OOG6_102127
Panther 1 1.100 - - O PTHR10556
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2319
SonicParanoid 1 1.000 - - X1032
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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