DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p63E and MDY2

DIOPT Version :9

Sequence 1:NP_001261383.1 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_014530.1 Gene:MDY2 / 854038 SGDID:S000005471 Length:212 Species:Saccharomyces cerevisiae


Alignment Length:237 Identity:49/237 - (20%)
Similarity:87/237 - (36%) Gaps:52/237 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KTLTGKTIT------LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
            |.||..|:|      ...:|...:.|:        |:|....:..:...:.:..:...|...|..
Yeast    15 KFLTLATLTEPKLPKSYTKPLKDVTNL--------GVPLPTLKYKYKQNRAKKLKLHQDQQGQDN 71

  Fly    65 STLHLVLRLRGGMQIFVKTLTGK-TITLEVEPSDTIENVKAK-IQDKEGIPPDQQRLIFAGKQLE 127
            :.:||.|:         |....| :|..:..|||||..:|.. |.:::.....:.:|:..||.|.
Yeast    72 AAVHLTLK---------KIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLH 127

  Fly   128 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPD 191
            |...|||..:                     |....|||:.::|:.|| :..:|:.......|..
Yeast   128 DNLFLSDLKV---------------------TPANSTITVMIKPNPTISKEPEAEKSTNSPAPAP 171

  Fly   192 QQRLIFAGKQLEDGRTLSDYNIQKE--STLHLVLRLRGGMQI 231
            .|.|......:|   .|...|.:.:  :...::.||:.|..:
Yeast   172 PQELTVPWDDIE---ALLKNNFENDQAAVRQVMERLQKGWSL 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_001261383.1 Ubiquitin 1..76 CDD:176398 14/75 (19%)
UBQ 1..72 CDD:214563 13/71 (18%)
Ubiquitin 77..152 CDD:176398 18/76 (24%)
UBQ 77..148 CDD:214563 18/72 (25%)
Ubiquitin 153..228 CDD:176398 16/77 (21%)
UBQ 153..224 CDD:214563 14/73 (19%)
Ubiquitin 229..304 CDD:176398 0/3 (0%)
UBQ 229..300 CDD:214563 0/3 (0%)
Ubiquitin 305..380 CDD:176398
UBQ 305..376 CDD:214563
Ubiquitin 381..456 CDD:176398
UBQ 381..452 CDD:214563
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
Ubiquitin 533..608 CDD:176398
UBQ 533..604 CDD:214563
Ubiquitin 609..684 CDD:176398
UBQ 609..680 CDD:214563
Ubiquitin 685..760 CDD:176398
UBQ 685..756 CDD:214563
MDY2NP_014530.1 Get5_bdg 8..59 CDD:407090 9/51 (18%)
Ubl_Rad23 74..148 CDD:340503 25/103 (24%)
Get5_C 174..212 CDD:408303 7/40 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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