DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p63E and UBQ13

DIOPT Version :9

Sequence 1:NP_001261383.1 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_176714.4 Gene:UBQ13 / 842845 AraportID:AT1G65350 Length:319 Species:Arabidopsis thaliana


Alignment Length:318 Identity:286/318 - (89%)
Similarity:294/318 - (92%) Gaps:15/318 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||||||||||||||||||.||||:||||||||||||||||||||||||||||||||:||||||||
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
            |||||||||||||||||||||||||||||.||||:||||||||||||||||||||||||||||||
plant    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

  Fly   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
            ||:| |||||||||||||||||||||||||||||||||||.||||:||||||||||.||||||||
plant   131 TLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRL 194

  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260
            |||||||||||||:|||||||||||||||||||||||||||||||||||||.|.||:||||||||
plant   195 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQD 259

  Fly   261 KEGIPPDQQRLIFAGKQLEDG--------------RTLSDYNIQKESTLHLVLRLRGG 304
            |||||||||||||||||||.|              ..|:|||||||||||||||||||
plant   260 KEGIPPDQQRLIFAGKQLEGGPGGGGGHFQKAEALAFLADYNIQKESTLHLVLRLRGG 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_001261383.1 Ubiquitin 1..76 CDD:176398 71/74 (96%)
UBQ 1..72 CDD:214563 67/70 (96%)
Ubiquitin 77..152 CDD:176398 70/74 (95%)
UBQ 77..148 CDD:214563 66/70 (94%)
Ubiquitin 153..228 CDD:176398 70/74 (95%)
UBQ 153..224 CDD:214563 66/70 (94%)
Ubiquitin 229..304 CDD:176398 67/88 (76%)
UBQ 229..300 CDD:214563 63/84 (75%)
Ubiquitin 305..380 CDD:176398 286/318 (90%)
UBQ 305..376 CDD:214563 286/318 (90%)
Ubiquitin 381..456 CDD:176398
UBQ 381..452 CDD:214563
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
Ubiquitin 533..608 CDD:176398
UBQ 533..604 CDD:214563
Ubiquitin 609..684 CDD:176398
UBQ 609..680 CDD:214563
Ubiquitin 685..760 CDD:176398
UBQ 685..756 CDD:214563
UBQ13NP_176714.4 Ubiquitin 1..76 CDD:176398 71/74 (96%)
UBQ 1..72 CDD:214563 67/70 (96%)
Ubiquitin 77..151 CDD:176398 70/74 (95%)
UBQ 77..147 CDD:214563 66/70 (94%)
Ubiquitin 152..227 CDD:176398 70/74 (95%)
UBQ 152..223 CDD:214563 66/70 (94%)
UBQ 228..317 CDD:294102 67/88 (76%)
UBQ 228..313 CDD:214563 63/84 (75%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1562
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1536766at2759
OrthoFinder 1 1.000 - - FOG0000540
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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