DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p63E and UBQ9

DIOPT Version :9

Sequence 1:NP_001261383.1 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_568552.1 Gene:UBQ9 / 833742 AraportID:AT5G37640 Length:322 Species:Arabidopsis thaliana


Alignment Length:305 Identity:265/305 - (86%)
Similarity:282/305 - (92%) Gaps:1/305 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |||..||||.||||::|..||||.||||||||.||||.|||||||:||.|:|||||:||:|||:|
plant     3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDS 67

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
            .|||.||||||||||||||||||||||||.||||:|||||||||||:||||||||||||||:|||
plant    68 ILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGR 132

  Fly   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
            ||:||||||||||||||||||||||||:|||.|||.||||.|||.:|||||||||||||||||||
plant   133 TLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRL 197

  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260
            |||||||||||||:||||||||||||||||.|||||||.||||||||||||.||||:||||||||
plant   198 IFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQD 262

  Fly   261 KEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGG 304
            ||.|.||||||||||:||||| .||:|||||||||||||||||||
plant   263 KERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_001261383.1 Ubiquitin 1..76 CDD:176398 56/74 (76%)
UBQ 1..72 CDD:214563 52/70 (74%)
Ubiquitin 77..152 CDD:176398 69/74 (93%)
UBQ 77..148 CDD:214563 65/70 (93%)
Ubiquitin 153..228 CDD:176398 66/74 (89%)
UBQ 153..224 CDD:214563 63/70 (90%)
Ubiquitin 229..304 CDD:176398 66/75 (88%)
UBQ 229..300 CDD:214563 62/71 (87%)
Ubiquitin 305..380 CDD:176398 265/305 (87%)
UBQ 305..376 CDD:214563 265/305 (87%)
Ubiquitin 381..456 CDD:176398
UBQ 381..452 CDD:214563
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
Ubiquitin 533..608 CDD:176398
UBQ 533..604 CDD:214563
Ubiquitin 609..684 CDD:176398
UBQ 609..680 CDD:214563
Ubiquitin 685..760 CDD:176398
UBQ 685..756 CDD:214563
UBQ9NP_568552.1 UBQ 3..78 CDD:294102 56/74 (76%)
UBQ 3..74 CDD:214563 52/70 (74%)
Ubiquitin 79..154 CDD:176398 69/74 (93%)
UBQ 79..150 CDD:214563 65/70 (93%)
Ubiquitin 155..230 CDD:176398 66/74 (89%)
UBQ 155..226 CDD:214563 63/70 (90%)
UBQ 231..307 CDD:294102 66/75 (88%)
UBQ 231..303 CDD:214563 62/71 (87%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1562
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1536766at2759
OrthoFinder 1 1.000 - - FOG0000540
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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