DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p63E and UBQ4

DIOPT Version :9

Sequence 1:NP_001261383.1 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_568397.1 Gene:UBQ4 / 832184 AraportID:AT5G20620 Length:382 Species:Arabidopsis thaliana


Alignment Length:380 Identity:365/380 - (96%)
Similarity:375/380 - (98%) Gaps:0/380 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||||||||||||||||||.||||:||||||||||||||||||||||||||||||||:||||||||
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
            |||||||||||||||||||||||||||||.||||:||||||||||||||||||||||||||||||
plant    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

  Fly   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
            ||:|||||||||||||||||||||||||||||||||||||.||||:|||||||||||||||||||
plant   131 TLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195

  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260
            |||||||||||||:|||||||||||||||||||||||||||||||||||||.||||:||||||||
plant   196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 260

  Fly   261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 325
            ||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||.||
plant   261 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 325

  Fly   326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
            ||:||||||||||||||||||||||||||||||||:|||||||||||||||||||
plant   326 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_001261383.1 Ubiquitin 1..76 CDD:176398 71/74 (96%)
UBQ 1..72 CDD:214563 67/70 (96%)
Ubiquitin 77..152 CDD:176398 71/74 (96%)
UBQ 77..148 CDD:214563 67/70 (96%)
Ubiquitin 153..228 CDD:176398 71/74 (96%)
UBQ 153..224 CDD:214563 67/70 (96%)
Ubiquitin 229..304 CDD:176398 71/74 (96%)
UBQ 229..300 CDD:214563 67/70 (96%)
Ubiquitin 305..380 CDD:176398 71/74 (96%)
UBQ 305..376 CDD:214563 67/70 (96%)
Ubiquitin 381..456 CDD:176398 365/380 (96%)
UBQ 381..452 CDD:214563 365/380 (96%)
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
Ubiquitin 533..608 CDD:176398
UBQ 533..604 CDD:214563
Ubiquitin 609..684 CDD:176398
UBQ 609..680 CDD:214563
Ubiquitin 685..760 CDD:176398
UBQ 685..756 CDD:214563
UBQ4NP_568397.1 Ubl_ubiquitin 1..76 CDD:340501 71/74 (96%)
Ubl_ubiquitin 77..152 CDD:340501 71/74 (96%)
Ubl_ubiquitin 153..228 CDD:340501 71/74 (96%)
Ubl_ubiquitin 229..304 CDD:340501 71/74 (96%)
Ubl_ubiquitin 305..380 CDD:340501 71/74 (96%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1562
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000540
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100667
Panther 1 1.100 - - O PTHR10666
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.770

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