DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubi-p63E and AT4G01000

DIOPT Version :10

Sequence 1:NP_523909.2 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_192009.1 Gene:AT4G01000 / 826414 AraportID:AT4G01000 Length:415 Species:Arabidopsis thaliana


Alignment Length:329 Identity:82/329 - (24%)
Similarity:147/329 - (44%) Gaps:69/329 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
            :|.||:.|.||::||.. .|....|.:|.:|.::..||...||||..|.|:.||..:|    |.:
plant     9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS----QPD 69

  Fly    65 STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE-------------NVKAKIQD-KEGIPPD 115
            :|::|||.||||...|...|.|..:....:.::..:             |.:.::|: |:|    
plant    70 ATVNLVLSLRGGKGGFGSLLRGGGMKAGQKKTNNFDACRDMSGRRLRHVNAENRLQEWKDG---- 130

  Fly   116 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL--------RGGMQIFV---KTLTGKTI-TLE 168
                       |:||     |::|::..:|..:.        .|..|.:|   |..:.|.| .::
plant   131 -----------EEGR-----NLEKKALEYLKKQSNKVKQGVGNGATQKYVNKYKEESDKCILAVD 179

  Fly   169 VEPSDTIENVKAKIQDKEGIPPDQQR--LIFAGKQ-LEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230
            :..:::.:|.|.|.  |.|...::::  .|:.||: :||..  ||.:..:|....:||. .||..
plant   180 LALNESFKNGKRKA--KIGAESEKKKRLKIWKGKRAVEDSD--SDDSDDEEDEKSVVLN-NGGHD 239

  Fly   231 IFVKTLTGKTI--TLEVEPSDTI-----ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
               ...:||:.  :...|.:|.:     :.||.:|...:||..::...:.....::|..|::|..
plant   240 ---GDSSGKSSCNSGSEEENDAVMHRSFDVVKEEITGVQGIIEEEMNDLPVSVAVDDANTVADEM 301

  Fly   289 IQKE 292
            .|.|
plant   302 DQLE 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_523909.2 Ubl_ubiquitin 1..76 CDD:340501 30/75 (40%)
Ubl_ubiquitin 77..152 CDD:340501 13/96 (14%)
Ubl_ubiquitin 153..228 CDD:340501 20/81 (25%)
Ubl_ubiquitin 229..304 CDD:340501 14/71 (20%)
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
Ubl_ubiquitin 533..608 CDD:340501
Ubl_ubiquitin 609..684 CDD:340501
Ubl_ubiquitin 685..760 CDD:340501
AT4G01000NP_192009.1 Ubl1_cv_Nsp3_N-like 10..156 CDD:475130 45/169 (27%)
SDE2_2C 351..402 CDD:463835
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.