DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p63E and AT4G05310

DIOPT Version :10

Sequence 1:NP_523909.2 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_192440.1 Gene:AT4G05310 / 825879 AraportID:AT4G05310 Length:415 Species:Arabidopsis thaliana


Alignment Length:474 Identity:95/474 - (20%)
Similarity:179/474 - (37%) Gaps:145/474 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL--SDYNIQK 63
            |:..|:.|.|.:..:|||.:||:..||.||:..:.:|..:|.||.      ||..:  .|.|:.:
plant     1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIV------DGIFILREDLNLDQ 59

  Fly    64 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS-DTIENVKAKIQDKEGIPPDQQRLI---FAGK 124
            ....|                 ...|.|||.|. :.|.|...:|...|..||.....:   ||  
plant    60 CQIFH-----------------DSQIQLEVSPDVNPIHNNDDQIPQTEQSPPAPWISVEEYFA-- 105

  Fly   125 QLEDGRTLSDYNIQK-----ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 184
              |....|::..|:|     ..|...:.:::...|           |.|..||::::.. ..|||
plant   106 --EQDWPLTEEEIRKIYSYRPETTQDISKIQDAHQ-----------TEESPPSNSVKET-VNIQD 156

  Fly   185 ----------KEGIPPDQQ----RLIFAGKQLEDGRT--------LSDYNIQKESTLHLVLR--- 224
                      .:.:||.:|    .|:   |::.:|:.        :|.|....|...:::::   
plant   157 SSVKFASKNNNDQVPPTKQFPQSNLV---KKITNGKKRVRQMLVYVSPYPGMNEVPTNILVQVKV 218

  Fly   225 ------LRGGMQI----FVKTLTGKTITLE-------VEPSDTIENV-------KAKIQDKE--- 262
                  |||.|::    ::.|...:.:..:       |:|.|||..|       .:||||..   
plant   219 TDEVKTLRGLMKLAQEGYIFTHNNQVLNEDQSYECNSVKPLDTIVIVPRRVIQETSKIQDSSVTV 283

  Fly   263 GIPP-DQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 325
            .:|. :|.....:.|::.| .:.:..|.:...|...       |::.|::        ::|..:|
plant   284 QVPQMEQSPASNSVKEITDPKKKIKVYVVAASSECK-------GLKRFIE--------VDVNSTD 333

  Fly   326 TIENVKAKIQDK----------EG---IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 377
            .::.::.::.:.          ||   :...::|::...:..|..|.|      ...|:::|   
plant   334 QVKILRTELVESGRRGHIRMPHEGYFFVDRKKERVLNEDQSFEWNRVL------PAETVYMV--- 389

  Fly   378 RGGMQIFVKTLT-GKTITL 395
            .|....|..:.| |..:|:
plant   390 SGRDTHFASSFTRGSKVTM 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_523909.2 Ubl_ubiquitin 1..76 CDD:340501 22/76 (29%)
Ubl_ubiquitin 77..152 CDD:340501 18/83 (22%)
Ubl_ubiquitin 153..228 CDD:340501 19/105 (18%)
Ubl_ubiquitin 229..304 CDD:340501 18/97 (19%)
Ubl_ubiquitin 305..380 CDD:340501 11/87 (13%)
Ubl_ubiquitin 381..456 CDD:340501 4/16 (25%)
Ubl_ubiquitin 457..532 CDD:340501
Ubl_ubiquitin 533..608 CDD:340501
Ubl_ubiquitin 609..684 CDD:340501
Ubl_ubiquitin 685..760 CDD:340501
AT4G05310NP_192440.1 ubiquitin 5..75 CDD:459726 25/92 (27%)
Blue background indicates that the domain is not in the aligned region.

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