DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p63E and AT4G05250

DIOPT Version :10

Sequence 1:NP_523909.2 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_192434.1 Gene:AT4G05250 / 825873 AraportID:AT4G05250 Length:318 Species:Arabidopsis thaliana


Alignment Length:82 Identity:26/82 - (31%)
Similarity:40/82 - (48%) Gaps:10/82 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |.:|.:|.:|....:|:...||:..:|.||:..:.||..:|.|||.|..|:|...:....|...|
plant     1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQDHLDIKQCVILNHS 65

  Fly    66 TLHLVLRLRGGMQIFVK 82
              |:        ||||:
plant    66 --HI--------QIFVE 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_523909.2 Ubl_ubiquitin 1..76 CDD:340501 22/74 (30%)
Ubl_ubiquitin 77..152 CDD:340501 4/6 (67%)
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
Ubl_ubiquitin 533..608 CDD:340501
Ubl_ubiquitin 609..684 CDD:340501
Ubl_ubiquitin 685..760 CDD:340501
AT4G05250NP_192434.1 ubiquitin 3..72 CDD:459726 24/78 (31%)
Blue background indicates that the domain is not in the aligned region.

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