DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubi-p63E and Oas1e

DIOPT Version :9

Sequence 1:NP_001261383.1 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_001009492.1 Gene:Oas1e / 494201 RGDID:1359611 Length:361 Species:Rattus norvegicus


Alignment Length:243 Identity:47/243 - (19%)
Similarity:88/243 - (36%) Gaps:87/243 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IQKESTLHLVLRLRGGMQIFVKTLTGK--------TITLEVEPSDTIENVKAKIQDKEGIPPDQQ 117
            :|:|....|...::...|...:||:.|        .:..:|:|:   .:|..:::||:...||..
  Rat   110 LQQEKQFKLNFEVQSTEQPDSRTLSIKLSSPQLQQEVEFDVQPA---YDVLYELRDKDDFNPDNY 171

  Fly   118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI--------FVKTLTGKTITLEVEPSDT 174
            |.|:|             .:.:|||   .|.:.|...:        |:|....|...:       
  Rat   172 REIYA-------------RLIREST---TLEMEGEFSVCFTDLHQNFLKYRAPKLWNI------- 213

  Fly   175 IENVK-----AKIQDKEGIPPD---QQRLIFAGKQ-LEDG---------RTLSD----------- 210
            |..||     .|.:.|..:||.   :...::|.:: |||.         |::.|           
  Rat   214 IRLVKHWYQLCKKRLKYPLPPQYALELLTVYAWERGLEDRPALHTGHCFRSVLDLITEYKKLRIY 278

  Fly   211 ----YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 254
                |..:||:..:|..:::            |...:.::|:|...||
  Rat   279 WTWCYEFKKETFDYLSRQIK------------KDRPVILDPADPTRNV 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_001261383.1 Ubiquitin 1..76 CDD:176398 3/14 (21%)
UBQ 1..72 CDD:214563 3/10 (30%)
Ubiquitin 77..152 CDD:176398 18/82 (22%)
UBQ 77..148 CDD:214563 17/78 (22%)
Ubiquitin 153..228 CDD:176398 20/115 (17%)
UBQ 153..224 CDD:214563 20/111 (18%)
Ubiquitin 229..304 CDD:176398 5/26 (19%)
UBQ 229..300 CDD:214563 5/26 (19%)
Ubiquitin 305..380 CDD:176398
UBQ 305..376 CDD:214563
Ubiquitin 381..456 CDD:176398
UBQ 381..452 CDD:214563
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
Ubiquitin 533..608 CDD:176398
UBQ 533..604 CDD:214563
Ubiquitin 609..684 CDD:176398
UBQ 609..680 CDD:214563
Ubiquitin 685..760 CDD:176398
UBQ 685..756 CDD:214563
Oas1eNP_001009492.1 NT_2-5OAS_ClassI-CCAase 27..177 CDD:143390 17/82 (21%)
OAS1_C 167..351 CDD:287404 35/183 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.