DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ubi-p63E and Nedd8

DIOPT Version :9

Sequence 1:	NP_001261383.1	Gene:	Ubi-p63E / 38456	FlyBaseID:	FBgn0003943	Length:	763	Species:	Drosophila melanogaster
Sequence 2:	NP_001286070.1	Gene:	Nedd8 / 35151	FlyBaseID:	FBgn0032725	Length:	84	Species:	Drosophila melanogaster

Alignment Length:	79	Identity:	45/79 - (56%)
Similarity:	61/79 - (77%)	Gaps:	0/79 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |.|.|||||||.|.:::||:|.::.:|.::::||||||.||||||:|||:.|.:|.:||.:|..|
  Fly     1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGS 65

  Fly    66 TLHLVLRLRGGMQI 79
            .|||||.||||..|
  Fly    66 VLHLVLALRGGDSI 79

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ubi-p63E	NP_001261383.1	Ubiquitin	1..76	CDD:176398	42/74 (57%)
		UBQ	1..72	CDD:214563	39/70 (56%)
		Ubiquitin	77..152	CDD:176398	1/3 (33%)
		UBQ	77..148	CDD:214563	1/3 (33%)
		Ubiquitin	153..228	CDD:176398
		UBQ	153..224	CDD:214563
		Ubiquitin	229..304	CDD:176398
		UBQ	229..300	CDD:214563
		Ubiquitin	305..380	CDD:176398
		UBQ	305..376	CDD:214563
		Ubiquitin	381..456	CDD:176398
		UBQ	381..452	CDD:214563
		Ubiquitin	457..532	CDD:176398
		UBQ	457..528	CDD:214563
		Ubiquitin	533..608	CDD:176398
		UBQ	533..604	CDD:214563
		Ubiquitin	609..684	CDD:176398
		UBQ	609..680	CDD:214563
		Ubiquitin	685..760	CDD:176398
		UBQ	685..756	CDD:214563
Nedd8	NP_001286070.1	Ubl_NEDD8	3..76	CDD:340504	41/72 (57%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45440121
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D135494at33392
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10666
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.850