DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubi-p63E and Ubqln3

DIOPT Version :9

Sequence 1:NP_001261383.1 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_001371113.1 Gene:Ubqln3 / 244178 MGIID:3045291 Length:681 Species:Mus musculus


Alignment Length:739 Identity:139/739 - (18%)
Similarity:243/739 - (32%) Gaps:238/739 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
            :::.|||...|. ...|..:.||..:|.||..:....|:|..||||||.|:|..:|:...::...
Mouse    45 IRVTVKTPKDKE-DFSVVDTCTIRQLKEKISHRFKAHPNQLVLIFAGKILKDPDSLAQCGVRDGL 108

  Fly   218 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE---------NVKAKIQDKEGIPPDQQRLIF 273
            |:|||::::           .:||..|. ||..:.         ...:.:...:|.|.....::.
Mouse   109 TVHLVIKMQ-----------RRTIGTEC-PSPPVSIPGPNPGEIPQSSSVYSVDGSPSFSLGVLT 161

  Fly   274 AGKQLEDGRTLSDYNIQKESTL-------HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 331
            ....|  |.|...::.|..|.:       .||.:|..  ..|::.|...|           ..|:
Mouse   162 GLSGL--GLTSGSFSDQPGSLMWQHISVPELVAQLVD--DPFIQGLLSNT-----------GLVR 211

  Fly   332 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 396
            ..:.|.    |..|.||....::  |..|::..|.::                         |:|
Mouse   212 QLVLDN----PHMQHLIQQNPEI--GHILNNPEIMRQ-------------------------TME 245

  Fly   397 VEPSDTIENVKAKIQDK-----EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
            ...:.::.....:.||:     |.||.....|          ||:  |....:..|:.|....||
Mouse   246 FLRNPSMMQEMMRSQDRALSNLESIPGGYNVL----------RTM--YTDIMDPMLNAVQEQFGG 298

  Fly   457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521
             ..||...|..|.|...:||.| ||.     |....|......:..|:|...||...|.:..:. 
Mouse   299 -NPFVTATTASTTTTSSQPSRT-ENC-----DPLPNPWTSTYGVSGGRQGRGGRQSGDQDASEN- 355

  Fly   522 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL---- 582
                    |..:..|:..: |....|: :..:|.:::::.:|.........|....:|.::    
Mouse   356 --------RNRLPSFLGNI-GLFDYLQ-QLHETSQSLESYLQGTVPTSNPSQESPLSGNRVPPTL 410

  Fly   583 -EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-------------GKTITLEVEPSDTIEN 633
             ...::.|..::.|||   :.::.:.....|::..|             ||..|   .||.::.|
Mouse   411 PSSPKSGSGQSLPKES---VAIKGKSSCPAFLRHSTENSTGQGGSLHDAGKGST---GPSTSLPN 469

  Fly   634 VKAKIQDKEG-----------------------IPPD--QQRLIFAGKQLEDGRTLSDYNIQKES 673
            :.::|.|...                       :||.  .:.|..||.. :..|..::.:.|...
Mouse   470 LTSQIGDSANRSSFVSTPSSLMSATPGVPESPWLPPTGYSRSLRSAGTN-QVPRIQNEIHQQLPL 533

  Fly   674 TLHL------------VLRLRGGMQI-----------FVKTLTGKTITLEVEPSDTIENVKAKIQ 715
            .|||            :|::..|:||           |:..|||            :..|....:
Mouse   534 LLHLQTAMANPRVMQALLQIEQGLQILATEAPRLLLWFMPCLTG------------LNGVTGGTE 586

  Fly   716 DKEGI--------PPDQQRLIFAGK---------------------------------QLEDGRT 739
            .:||:        .|..|..:..|.                                 |||..|.
Mouse   587 AREGVVMSEDPRPTPTPQISLAQGSTELGIHSSPFLQVLQALASTNPQQLQLEAHFRVQLEQLRA 651

  Fly   740 LSDYNIQKESTLHLVLRLRGGIQA 763
            :...|:  |:.|..::...|.:.|
Mouse   652 MGFLNL--EANLQALIATEGDVDA 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_001261383.1 Ubiquitin 1..76 CDD:176398
UBQ 1..72 CDD:214563
Ubiquitin 77..152 CDD:176398
UBQ 77..148 CDD:214563
Ubiquitin 153..228 CDD:176398 25/74 (34%)
UBQ 153..224 CDD:214563 25/70 (36%)
Ubiquitin 229..304 CDD:176398 15/90 (17%)
UBQ 229..300 CDD:214563 14/86 (16%)
Ubiquitin 305..380 CDD:176398 12/74 (16%)
UBQ 305..376 CDD:214563 12/70 (17%)
Ubiquitin 381..456 CDD:176398 13/79 (16%)
UBQ 381..452 CDD:214563 13/75 (17%)
Ubiquitin 457..532 CDD:176398 18/74 (24%)
UBQ 457..528 CDD:214563 17/70 (24%)
Ubiquitin 533..608 CDD:176398 11/79 (14%)
UBQ 533..604 CDD:214563 11/75 (15%)
Ubiquitin 609..684 CDD:176398 21/124 (17%)
UBQ 609..680 CDD:214563 20/120 (17%)
Ubiquitin 685..760 CDD:176398 19/126 (15%)
UBQ 685..756 CDD:214563 19/122 (16%)
Ubqln3NP_001371113.1 Ubl_PLICs 43..115 CDD:340506 25/70 (36%)
STI1 212..256 CDD:128966 10/74 (14%)
UBA_PLICs 641..678 CDD:270582 9/35 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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