DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p63E and Ubb

DIOPT Version :9

Sequence 1:NP_001261383.1 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_620250.2 Gene:Ubb / 192255 RGDID:621562 Length:305 Species:Rattus norvegicus


Alignment Length:304 Identity:303/304 - (99%)
Similarity:303/304 - (99%) Gaps:0/304 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
            ||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 TLHLVLRLRGGMQIFVKTLTVKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

  Fly   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195

  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260

  Fly   261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
            ||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_001261383.1 Ubiquitin 1..76 CDD:176398 74/74 (100%)
UBQ 1..72 CDD:214563 70/70 (100%)
Ubiquitin 77..152 CDD:176398 73/74 (99%)
UBQ 77..148 CDD:214563 69/70 (99%)
Ubiquitin 153..228 CDD:176398 74/74 (100%)
UBQ 153..224 CDD:214563 70/70 (100%)
Ubiquitin 229..304 CDD:176398 74/74 (100%)
UBQ 229..300 CDD:214563 70/70 (100%)
Ubiquitin 305..380 CDD:176398 303/304 (100%)
UBQ 305..376 CDD:214563 303/304 (100%)
Ubiquitin 381..456 CDD:176398
UBQ 381..452 CDD:214563
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
Ubiquitin 533..608 CDD:176398
UBQ 533..604 CDD:214563
Ubiquitin 609..684 CDD:176398
UBQ 609..680 CDD:214563
Ubiquitin 685..760 CDD:176398
UBQ 685..756 CDD:214563
UbbNP_620250.2 Ubiquitin 1..76 CDD:176398 74/74 (100%)
UBQ 1..72 CDD:214563 70/70 (100%)
Ubiquitin 77..152 CDD:176398 73/74 (99%)
UBQ 77..148 CDD:214563 69/70 (99%)
Ubiquitin 153..228 CDD:176398 74/74 (100%)
UBQ 153..224 CDD:214563 70/70 (100%)
Ubiquitin 229..304 CDD:176398 74/74 (100%)
UBQ 229..300 CDD:214563 70/70 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 143 1.000 Domainoid score I4522
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1536766at2759
OrthoFinder 1 1.000 - - FOG0000540
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100667
Panther 1 1.100 - - LDO PTHR10666
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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