DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p63E and F52C6.2

DIOPT Version :10

Sequence 1:NP_523909.2 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_494128.3 Gene:F52C6.2 / 173558 WormBaseID:WBGene00018659 Length:228 Species:Caenorhabditis elegans


Alignment Length:258 Identity:81/258 - (31%)
Similarity:123/258 - (47%) Gaps:70/258 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF-------AGKQ---LEDGRT 55
            |.:.:||.||||||:|...|     ||.:::.|:|:       :|       ||.|   :||  |
 Worm     1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGV-------VFAVSYDKDAGNQIIEMED--T 51

  Fly    56 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD----- 115
            :.|..||:...    ..||...::     ||..|  :||.|||  |...:..|..|.|.:     
 Worm    52 VQDVKIQEAQQ----APLRESEEV-----TGDPI--KVEASDT--NRNEENPDLAGPPAEPVIRG 103

  Fly   116 ---QQRLI---FAGKQLED--------------GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 160
               ..|::   .|||::..              .|..|.|.|::.|       :.|...:|||..
 Worm   104 TAASGRIVNVRLAGKRIVQPNRRFTSYLPSSAVRRVASPYQIRRVS-------VDGNFNVFVKNS 161

  Fly   161 T-GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
            | |||..:.::.:|||..:|.|:|:||||||:||||:|.|.:|.|.||::...:::.::|.||
 Worm   162 TGGKTTAVSIKNTDTIGTLKLKVQEKEGIPPNQQRLLFKGSELMDYRTVAHCGLRQGTSLDLV 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_523909.2 Ubl_ubiquitin 1..76 CDD:340501 27/84 (32%)
Ubl_ubiquitin 77..152 CDD:340501 21/99 (21%)
Ubl_ubiquitin 153..228 CDD:340501 32/71 (45%)
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
Ubl_ubiquitin 533..608 CDD:340501
Ubl_ubiquitin 609..684 CDD:340501
Ubl_ubiquitin 685..760 CDD:340501
F52C6.2NP_494128.3 ubiquitin 156..224 CDD:459726 30/67 (45%)
Blue background indicates that the domain is not in the aligned region.

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