DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p63E and ubl4a

DIOPT Version :9

Sequence 1:NP_001261383.1 Gene:Ubi-p63E / 38456 FlyBaseID:FBgn0003943 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_001096510.1 Gene:ubl4a / 100125140 XenbaseID:XB-GENE-6455973 Length:148 Species:Xenopus tropicalis


Alignment Length:134 Identity:42/134 - (31%)
Similarity:67/134 - (50%) Gaps:16/134 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||:.||.|.||...::|...||:..||..:::|..:|..||||:|.||.|.|...|:.|:|...|
 Frog     1 MQLTVKALKGKEANIQVSEGDTVLAVKRLVEEKLKVPVSQQRLLFRGKALADEHCLAHYSIGPGS 65

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI-FAGKQLEDG 129
            .|:|:::    .|:..:..:|         .:|.....:.|..|...|.|.:|:: :..|..|  
 Frog    66 RLNLMVK----EQVAPEGHSG---------GNTAWKSLSVILRKHFSPTDAERVLEYVQKDYE-- 115

  Fly   130 RTLS 133
            |:||
 Frog   116 RSLS 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p63ENP_001261383.1 Ubiquitin 1..76 CDD:176398 29/74 (39%)
UBQ 1..72 CDD:214563 29/70 (41%)
Ubiquitin 77..152 CDD:176398 13/58 (22%)
UBQ 77..148 CDD:214563 13/58 (22%)
Ubiquitin 153..228 CDD:176398
UBQ 153..224 CDD:214563
Ubiquitin 229..304 CDD:176398
UBQ 229..300 CDD:214563
Ubiquitin 305..380 CDD:176398
UBQ 305..376 CDD:214563
Ubiquitin 381..456 CDD:176398
UBQ 381..452 CDD:214563
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
Ubiquitin 533..608 CDD:176398
UBQ 533..604 CDD:214563
Ubiquitin 609..684 CDD:176398
UBQ 609..680 CDD:214563
Ubiquitin 685..760 CDD:176398
UBQ 685..756 CDD:214563
ubl4aNP_001096510.1 Ubl_UBL4A_like 1..72 CDD:340505 29/70 (41%)
Tugs 87..133 CDD:375372 10/35 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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