DRSC/TRiP Functional Genomics Resources

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Protein Alignment Awh and PDLIM7

DIOPT Version :9

Sequence 1:NP_001261379.1 Gene:Awh / 38451 FlyBaseID:FBgn0013751 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_005442.2 Gene:PDLIM7 / 9260 HGNCID:22958 Length:457 Species:Homo sapiens


Alignment Length:116 Identity:42/116 - (36%)
Similarity:55/116 - (47%) Gaps:3/116 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSK 71
            |||.|.:.|:.. .:.....:||.||..|..|..|: |.::.::.|...||:.||.|.||.||..
Human   340 SCAKCKKKITGE-IMHALKMTWHVHCFTCAACKTPI-RNRAFYMEEGVPYCERDYEKMFGTKCHG 402

  Fly    72 CCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 122
            |...|.|.|....|....:|..||.|..|...|. |:.|....||.|||:|
Human   403 CDFKIDAGDRFLEALGFSWHDTCFVCAICQINLE-GKTFYSKKDRPLCKSH 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AwhNP_001261379.1 LIM1_AWH 8..61 CDD:188759 15/52 (29%)
LIM2_AWH 69..123 CDD:188765 20/54 (37%)
Homeobox 152..204 CDD:278475
PDLIM7NP_005442.2 PDZ_signaling 5..79 CDD:238492
Atrophin-1 <81..254 CDD:331285
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 82..142
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..226
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..258
LIM1_Enigma 282..333 CDD:188836
LIM2_Enigma 341..392 CDD:188840 15/52 (29%)
LIM3_Enigma 400..454 CDD:188842 20/54 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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