DRSC/TRiP Functional Genomics Resources

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Protein Alignment Awh and ATHB-15

DIOPT Version :10

Sequence 1:NP_001261379.1 Gene:Awh / 38451 FlyBaseID:FBgn0013751 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_849795.1 Gene:ATHB-15 / 841645 AraportID:AT1G52150 Length:837 Species:Arabidopsis thaliana


Alignment Length:165 Identity:39/165 - (23%)
Similarity:67/165 - (40%) Gaps:37/165 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 GCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDG---QDLERIASV-TGLSKRVTQVWFQ 197
            ||..:|      |.||  :|.||::.|:..:.....|..   |.|.|...: :.:..:..:||||
plant    11 GCLDNG------KYVR--YTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQ 67

  Fly   198 NSRARQKKHIHAGK-----------NKIREPEGSSFARHINLQLTYS---FQNNAQNPMHLNGSK 248
            |.|.|:|:...|.:           ||:...|.....:.:: ||.:.   |:.:..||.      
plant    68 NRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVS-QLVHENSYFRQHTPNPS------ 125

  Fly   249 AGLYPTHESSMDELSQDSSVHCMPSEVXLEQSSPA 283
               .|..::|.:.: ..|..|.:.|:. ...:|||
plant   126 ---LPAKDTSCESV-VTSGQHQLASQNPQRDASPA 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AwhNP_001261379.1 LIM1_AWH 8..61 CDD:188759
LIM2_AWH 69..123 CDD:188765
Homeodomain 149..205 CDD:459649 18/59 (31%)
ATHB-15NP_849795.1 Homeodomain 17..75 CDD:459649 18/59 (31%)
bZIP <69..108 CDD:269834 7/38 (18%)
START_ArGLABRA2_like 155..371 CDD:176884 2/2 (100%)
MEKHLA 693..836 CDD:462555
Blue background indicates that the domain is not in the aligned region.

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