Protein Alignment Awh and PHV

DIOPT Version :10

• Sequence 1: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Sequence 2: NP_174337.1
• Gene: PHV / 839928
• AraportID: AT1G30490
• Length: 841
• Species: Arabidopsis thaliana
• Alignment Length: 196
• Identity: 39/196 - (19%)
• Similarity: 70/196 - (35%)
• Gaps: 55/196 - (28%)

  Fly   113 MDDRVLCKAHYLETVEGGTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDG-- 175
            ||||               .|.|:|.|...|       ||  :|.||::.|:..:.....|..
plant     7 MDDR---------------DSPDKGFDSGKY-------VR--YTPEQVEALERVYAECPKPSSLR 47

  Fly   176 -QDLERIASV-TGLSKRVTQVWFQNSRARQKKHIHAGK-----------NKIREPEGSSFARHIN 227
             |.|.|...: ..:..|..:|||||.|.|:|:...:.:           ||:...|.....:.::
plant    48 RQQLIRECPILCNIEPRQIKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVS 112

  Fly   228 LQLTY---------------SFQNNAQNPMHLNGSKAGLYPTHESSMDELSQDSSVHCMPSEVXL 277
             .|.|               :..|:.::.:.....:....|||:....:::..:::..:..|. .
plant   113 -NLVYENGFMKHRIHTASGTTTDNSCESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEETLA 176

  Fly   278 E 278
            |
plant   177 E 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759
		LIM2_AWH	69..123	CDD:188765	4/9 (44%)
		Homeodomain	149..205	CDD:459649	18/59 (31%)
PHV	NP_174337.1	Homeodomain	21..79	CDD:459649	19/66 (29%)
		bZIP	<73..112	CDD:269834	6/38 (16%)
		START_ArGLABRA2_like	164..380	CDD:176884	2/14 (14%)
		MEKHLA	693..840	CDD:462555