DRSC/TRiP Functional Genomics Resources

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Protein Alignment Awh and Zfhx4

DIOPT Version :10

Sequence 1:NP_001261379.1 Gene:Awh / 38451 FlyBaseID:FBgn0013751 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_001355600.1 Gene:Zfhx4 / 80892 MGIID:2137668 Length:3607 Species:Mus musculus


Alignment Length:83 Identity:40/83 - (48%)
Similarity:53/83 - (63%) Gaps:3/83 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 LETVEGGTTSSDEGCD-GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGL 187
            ||..|....|..||.: |:..|:.  ||:|||.|.|||::|...:.:||||..:.|:.||...||
Mouse  2576 LEDKEDNNCSEKEGGNSGEDQHRD--KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGL 2638

  Fly   188 SKRVTQVWFQNSRARQKK 205
            .|||.||||||:|||::|
Mouse  2639 KKRVVQVWFQNTRARERK 2656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AwhNP_001261379.1 LIM1_AWH 8..61 CDD:188759
LIM2_AWH 69..123 CDD:188765
Homeodomain 149..205 CDD:459649 31/55 (56%)
Zfhx4NP_001355600.1 C2H2 Zn finger 613..634 CDD:275368
C2H2 Zn finger 644..665 CDD:275368
C2H2 Zn finger 699..716 CDD:275368
C2H2 Zn finger 1396..1416 CDD:275371
C2H2 Zn finger 1424..1441 CDD:275371
SFP1 <1468..1608 CDD:227516
C2H2 Zn finger 1540..1564 CDD:275368
C2H2 Zn finger 1592..1610 CDD:275368
HOX 2127..2182 CDD:197696
Homeodomain 2224..2280 CDD:459649
COG5576 2536..>2658 CDD:227863 40/83 (48%)
Homeodomain 2600..2656 CDD:459649 31/55 (56%)
Homeodomain 2923..2979 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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